Brassica napus (rape): 111212205
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Entry
111212205 CDS
T04128
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
bna
Brassica napus (rape)
Pathway
bna03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111212205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
111212205
04121 Ubiquitin system [BR:
bna04121
]
111212205
03036 Chromosome and associated proteins [BR:
bna03036
]
111212205
03400 DNA repair and recombination proteins [BR:
bna03400
]
111212205
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
111212205
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
111212205
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
111212205
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
111212205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-HC5HC2H_2
zf-C3HC4
zf-C3HC4_3
RTT107_BRCT_5
zf-RING_5
zf-C3HC4_4
zf-RING_10
zf-RING_6
PHD_NSD
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
111212205
NCBI-ProteinID:
XP_022569369
LinkDB
All DBs
Position
C1:9277314..9281746
Genome browser
AA seq
901 aa
AA seq
DB search
MGDVSHLEKMGRELKCPICLSLFDSAASLSCNHVFCNGCIVKSMKVDATCPVCKIPFHRR
EIRGAPHMDSLVSIYKNMEDASGVHMFVSLNIPSPSEKEKHVGDASIEKANDKKHQGSSK
SRISKKRGFTKNKEKDLDPPGPIVMKPSSQTKKRVQLLQNQSSENSTESVESAEKLKDST
EETVIRLNEHTSLNKEENMAPFFWLRDENDEENLSQPAESDPFLDVTPVDVPSFSDLKDS
DHDSPSKAVEQERPNPKDMFDSEMFEWTQRPSSPEILPSPVKAKALGKDATQMNLPKGAS
SNKKRKAGTARNTVAKRLDGVSKEDYVEPSLGASISEKQETGGTSGTSTRKDENVKAKRA
TRNKGQTSRVQAGVNTHVEAEAKQGTKRKRSSVKVSPDPPVAESNELSLGTEDVGKGDQE
LTHGSAGTQPTEKYSLRKRRKSSASSFPKYSSATQPRGKKILSEELNQVEDRQDLTNQKK
PSVDNGTHTMQVSEKSSTMNKPSLGDNALLRRCDGPPINKSTCAFCQSSEDTEASGEMAH
YHRGEPVSADFSGGSKVIHAHKNCAEWAPNVYFNNLTAVNLDAELTRSRRITCSSCGLKG
AALGCYNASCKSSFHVTCAKLIPECRWDNENFVMLCPSDASSKLPCEETSPKERKRKRTP
PKRPQHSQPNQVSEKPDISELQSKPFHGVSKKLVLCCSGLTDEEKSVISEFAEVSGVTIS
RKWEPRVTHIIASINDNGACKRTLKFMMGVLEGKWILSIDWIKACMNNREYVTEEPYEIS
TDVHGTRQGPYIGRQRALKKEPKLFNGLKFYIMGDFEVAYKGYLQDMIVAAGGTILRRRP
ISNDDSEASTIIVFSVEPSKKKTLTQRRFDAEALAKSSRARAASSSWVLDSIAGCQILDL
I
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgtaagtcacctggagaagatgggaagagaactcaagtgccctatttgcttg
agtctatttgactctgcagcttcactttcgtgcaaccatgtgttctgcaatggatgcata
gtgaagtccatgaaagtggatgctacatgtccagtttgtaaaatcccattccatcgtaga
gagattcgaggtgctcctcatatggatagcttggtgagcatttacaagaacatggaagat
gcttctggtgtccacatgtttgttagcctgaatataccatcaccttcagaaaaagaaaag
catgtgggagatgcttccattgaaaaggctaatgataagaaacatcagggttctagtaag
agccgaatatccaagaagagagggtttacaaaaaacaaggaaaaagatcttgatccccct
ggacctattgttatgaaaccttcatcccaaaccaagaaaagggttcagttgttgcagaat
caatcttctgaaaactcaacagaatctgttgagtcagctgagaaactcaaggattcaact
gaagaaactgtgattcgcttgaatgagcatacgagtctgaataaagaagaaaatatggca
cccttcttttggttgagagatgaaaatgatgaggagaacttaagtcagccagcagaaagt
gatccgtttctagacgttacacctgttgatgttccttctttcagcgatttgaaggactca
gatcatgacagcccgtcgaaagcagttgagcaagaaaggcccaatccaaaagacatgttt
gacagtgaaatgtttgagtggactcaaaggccctcttctccagagattctacctagtcct
gtgaaggccaaggccctaggtaaagatgcgactcaaatgaatctacctaaaggagcatca
tccaataaaaaacgcaaagccggaactgcaagaaacacagttgctaaacgactcgatggg
gtttccaaggaggactacgtggaaccgtcgttaggagcaagtattagtgagaaacaagag
accggtgggacttctggcacatctaccaggaaggatgaaaatgtgaaagctaaacgagct
acaagaaacaagggccagacttcacgagttcaggctggtgtaaatacacatgtggaagca
gaggcaaagcaggggacaaagaggaaacgatctagcgttaaagtctctccggatccccca
gttgctgaatctaatgagctctcacttggaacagaagatgttggaaagggggatcaggaa
ctaacccatggttcagctggtacacaacccaccgagaagtactctctgagaaagagaaga
aaatcaagtgcatcttcctttccaaaatattcttctgctacacaaccgcgtggcaagaaa
atccttagtgaagagttgaatcaagtggaagatagacaagatttaactaaccaaaagaaa
ccgtctgtggataatggcactcataccatgcaagtttcagagaaaagctcaacgatgaac
aagccctcacttggagataatgcgcttttgcgacgatgtgatggacctccaataaataaa
tccacatgcgccttttgtcagtcttcagaagacacagaggcatcaggagaaatggctcac
taccacagaggtgaacctgtctctgcagattttagtggtgggtctaaggtcatacatgct
cacaaaaactgtgctgaatgggctccaaatgtgtacttcaacaaccttacggcagtcaac
cttgatgcggagctgacaagaagccggaggataacttgcagtagctgtggactcaaaggc
gcagcacttggctgttacaatgcgagttgcaagagtagctttcatgtgacgtgtgcaaag
ctgataccagaatgcagatgggacaatgaaaactttgtaatgctatgcccttcggatgca
tcctctaagttgccctgtgaagagactagtcctaaagaaagaaaacgcaagcgtactcct
cctaaaaggccacagcactctcagcctaatcaagtatctgagaaacctgacattagtgag
ctccagagcaagccttttcacggagtatccaagaaactggttctatgctgttcaggactt
acagatgaagagaagagtgtgatttcggaatttgctgaagtgtctggagttaccatctcg
agaaaatgggagccaagagttacacatatcattgcatcaatcaacgataatggagcctgc
aaaaggaccctcaaattcatgatgggggtcttggaggggaaatggattctaagcattgat
tggatcaaggcctgtatgaataacagagaatatgtaaccgaggagccatatgagatttcg
acagatgttcatggaacacgacaaggaccttatattggaagacaaagagctttgaagaag
gaaccaaaactttttaatgggctgaagttttacataatgggagatttcgaggttgcttac
aaagggtatcttcaagatatgattgtagcagcaggtgggactattctgcgcaggcgaccc
atttctaatgatgatagtgaagcttcgacgatcatagtgtttagtgttgagccaagcaag
aagaaaactctgacacaaagaagatttgatgctgaagccctggctaagtcttctagagca
agagctgcaagcagttcatgggtcttggattctattgcaggttgccaaattctagacttg
atataa
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