Brassica napus (rape): 111212370
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Entry
111212370 CDS
T04128
Name
(RefSeq) CLIP-associated protein
KO
K16578
CLIP-associating protein 1/2
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bna03036
]
111212370
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bna04812
]
111212370
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
111212370
Cytoskeleton proteins [BR:
bna04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
111212370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
Vac14_Fab1_bd
TOR1L1_N
Cnd1
PDS5
HEAT_2
HEAT_Maestro
TTI1
Adaptin_N
Tti2
UTP20
INTS1_R4
MMS19_N
Sec7-like_HDS
MMS19_C
HEAT_DAAF5
TPR_TTI1_C
Dopey_N
API5
HEAT_Maestro_2
TPR_TTI1_N
SEN1_N
Motif
Other DBs
NCBI-GeneID:
111212370
NCBI-ProteinID:
XP_048593081
LinkDB
All DBs
Position
A7:420800..428023
Genome browser
AA seq
1438 aa
AA seq
DB search
MEEALEMARAKDTKERMAAVERLHQLLEASRKSLSPSEVTSLVDSCLDLLKDSNFRVSQG
ALQALASAAVLAGEHLKLHLNALVPAVVERLGDSKQPVRDAARRLLTTLMEVSSPTIIVE
RAGSYGWLHKSWRVREEFARTVTSAIGLFASTELPLQRVILAPILQMLNDPNQAVREAAI
LCIEEMYMQGGNQFREELQRHHLPSYMVKDINARLERIEPQQRSTDSRSSHHAAVNEVKA
SSVNPKKSSPKAKISTRENSLFGGDPDITEKPIEPINVYSEKELIREFEKIASTLVPEKD
WSMRISAMRRVEGLVAGGATDYSCFRGLLKQLIGPLSTQLSDRRSTIVKQACHLLCLLSK
ELLGDFESCAEIFIPVLFKLVVITVLVIAESADNCIKTMLRNCKAARVLPRIAEAAKHDR
NAVLRARCCEYALLTLEHWPDAPEIQRSVDLYEDLIRCCVADAMSEVRATARMCYRLFAK
TWPDRSRRLFSSFDPVIQRLINEEEGGSHRRHASPSVRERHSQPSFSQTSAPSNLPGYGT
SAIVAMDRSSNLSSGGSLSSGLLLSQSKDLNKGSERSLESVLQSSKQKVSAIESMLRGLH
VSDRQNPAALRSSSLDLGVDPPSSRDPPFRASVPASNTLTNKTTAESMPSINRVSNRSGG
LGLSDIITQIQASKDSGRQSHRSNLLSESHPSFSSLTAKRVSERNERSSFEDNNDARRFM
VGHLDRQQMDNAYRDSTFRDSNASHVPNFQRPLLRKNVGGRLSAGRTRSFDDSQLQVGDM
SNYVDGPASLNEALNDGLNSSSDWCARVAAFNFLQTLLQQGAKGAQEVIQNFEKVMKLFL
RHLDDPHHKVAQAALSTLADLIPSCRKPFESYMERVLPHVFSRLIDPKEVVRQPCSSTLD
IVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNRYAGNPEISGNSGILKLWLA
KLTPLTRDKNTKLKEASITCIISVYNHYDSAGLLNYILSLSVEEQNSLRRSLKQYTPRIE
VDLLNYMQSKKEKLRVKSYDPSDAIGTSSEEGYPGASKKNIFLGRYSGGSVDSDSGRKWS
SSQEPTTVTGGGVGQSVYSGTQEKLYHNFRSGISSASDGLNQKDSDYTFTSAGHNLISRT
SPNGSSDKVENFDSVSPPHLEKNGLDMTNADSLEDRHENEASRELDLSQYMLSSIKVSPT
PESGPSIPQILHMINASDGSPSSSKISGLQQLIEASVANEESVWTKYFNQILTVVLEVVD
DEDLSVREVALSLISEMLKSQKDAMEDSVEIVIEKLLHVSKDSIPKVSSEAEQCLTTVLS
QYDPFRCLSVIVPQLVTEDEKTLVACINCLTKLVGRLSQEELMDQLSSFLPAVFEAFGNQ
SADVRKTVVFCLVDIYIMLGKAFLPYLEGLNSTQVRLVTIYANRISQARTGAPIDPDT
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagctctcgaaatggcgcgagccaaggacaccaaggagcgcatggcggctgtg
gagcgtctccaccagcttctcgaagcttctaggaagagcctgagtccgtcggaagtgacg
tcacttgttgattcctgtttggatctcctcaaggacagcaatttcagagtctctcaaggt
gcgcttcaggcgctcgcttccgccgccgtgctcgccggcgagcatctgaagcttcacttg
aacgcgcttgtacccgccgtagtggagcggcttggagacagcaagcaaccggttagggat
gcggcgaggcgtttgttgacaactctcatggaggtttcatctccgacgattatagtggaa
agagcaggttcgtatggttggctgcataagagttggagagttagggaagagttcgcgcgt
actgtcacttctgccattggtctctttgcatctactgagctccctcttcagcgtgttatt
cttgctccgatacttcagatgttaaatgatccgaatcaagcagtcagggaagctgcaatt
ctctgcattgaggagatgtacatgcagggtgggaatcaatttcgggaagagcttcagcgc
caccatcttccatcatatatggtgaaggatattaatgctagactggaacgtattgagcca
cagcagcgttctacagatagccgtagtagccaccatgctgctgttaatgaagttaaggct
tcaagtgtcaatcccaagaagagcagtccaaaggcaaagatttccacaagagagaactcg
ttatttggaggagatcctgacatcactgaaaaacccatcgagccaatcaatgtgtactca
gagaaggagctgatacgagaatttgagaaaattgcttcaacacttgtcccagagaaagac
tggtcaatgcgtatttcagctatgcggagggttgaaggacttgttgcgggaggtgcgact
gattactcttgttttcgaggtctcctgaagcaacttattggtcccttaagtacacagtta
tctgaccgaaggtctaccattgttaagcaggcttgccatctcttgtgtctcttatcaaaa
gagctactgggcgattttgaatcatgcgctgagatttttattccagtgcttttcaagctg
gttgtgatcactgtgcttgttatcgccgaatctgcggataactgcataaaaacgatgctg
cgtaactgcaaagctgctcgtgtacttcctcgcatagctgaggcagcaaaacatgaccgt
aatgcagttttgcgagcaaggtgttgtgaatatgcactgttaacactcgaacattggcct
gatgctccagaaattcagcggtcagttgatttatacgaggatctgattagatgctgtgtt
gcagatgctatgagtgaggtacgggcaacggctagaatgtgctacagactttttgcaaaa
acttggccggatcgttctcgtcgtttattttcctcctttgaccctgtcattcaaaggcta
ataaatgaagaagaaggtggaagtcataggagacatgcctcaccttctgtccgtgagaga
cactcccagccttcattttctcagacgtctgctccatctaatttacctggctatgggaca
tcagccatagtcgctatggatagaagttcaaatttatcctcaggaggatctctttcttct
gggctactcttatcccagtcaaaggatctcaataaaggttctgaacgtagtctagaaagc
gtgttacaatcaagcaagcagaaggtcagtgcaattgaaagtatgctccgaggactgcat
gtatcggatagacagaatccagcagctcttcgttccagtagtttggatctaggagttgac
cctccatcgtctcgtgatcctccattccgtgcttccgttccagcatccaatactctcaca
aataaaacaactgctgaatcaatgcctagtattaacagagtcagtaatcgcagtggtggc
cttggtttgtcagatatcatcacccagatacaagcttcaaaggactcaggaagacaatca
caccgtagcaatttgttgtccgagtctcatcctagcttttcatccttgacagctaaaagg
gtctcagagagaaacgagagaagttcttttgaggacaacaacgatgccaggcggtttatg
gtgggtcatttagacagacagcagatggataacgcttatagagattcaacattcagggat
tcaaacgctagtcatgttcccaatttccagaggccacttttgaggaaaaatgttggggga
agattgtcggcaggcaggacgaggagttttgatgatagccaactccaagttggtgacatg
tcaaattatgttgatggtccagcgtctctgaacgaggcccttaacgatggactgaattca
agttctgattggtgtgccagagttgcagcatttaattttctccaaactttactgcaacaa
ggcgcgaaaggtgctcaagaggtgatccagaattttgagaaagtaatgaaactatttctc
cggcatttggatgatcctcaccacaaggttgcacaagcagcactgtcgacactcgcggat
cttataccatcttgccgaaagccttttgagagctacatggaacgagtcttaccccatgtg
ttttcaaggctaatcgatcctaaagaggtagttagacaaccttgctcgtctaccctggat
attgtcagcaaaacctatagcgtagattcgcttttacctgcgttgcttcgttcactggat
gagcagagatcaccgaaggctaaattagccgtgatcgaatttgccatcaactccttcaac
aggtacgctggcaaccctgaaatttcgggtaatagtggcatcctgaagctttggctggca
aagttgacaccattaacccgcgacaagaataccaagttaaaagaagcttccatcacttgt
atcatatctgtttacaatcactatgattctgctggacttctaaattacattcttagtttg
tcggttgaggagcaaaactccttgagaagatccctcaaacagtatactccccgcatcgag
gtggacctattaaattatatgcagagtaagaaggagaaactgagagtaaagtcttatgac
ccatctgatgccattggaacatcatctgaagaaggatatccaggtgcttccaagaagaac
atattccttggcaggtactctgggggttccgtcgacagtgatagtggtaggaagtggagt
tcttcccaggagccaacaacggtcactggcggtggtgttggtcaaagtgtttacagtgga
actcaggaaaagctgtatcacaacttcagaagcgggataagttctgctagtgatgggttg
aaccaaaaggattctgattacacgtttacttcagctggtcataatttgatatcaagaact
agccctaatggaagctcagacaaggttgaaaactttgatagcgtatctccaccacattta
gagaaaaatggtctggatatgacaaatgctgattccttggaagatagacatgaaaatgag
gcttctcgcgaattagatttgagtcagtacatgctctcatctattaaggttagcccaaca
ccggaatctggacctagcattcctcagattctacatatgatcaatgcgagtgatggaagc
ccttcttcgagcaagatatctggactccagcaactaattgaagcctctgtagctaacgag
gaatcagtttggaccaagtacttcaatcaaatattgacggtagttcttgaagtggtcgat
gacgaagatttgtcagtcagagaagttgctctttccctgatatctgaaatgctaaagagc
cagaaagatgccatggaagattcggttgagatagtgattgagaagctgcttcatgtctcg
aaggactctattccaaaagtttccagtgaagctgagcaatgtttgaccacagttttatcc
caatacgatcctttcagatgcttaagtgttattgtgccacaattggtaacagaagatgag
aaaactctcgtcgcttgcatcaattgcttaactaagcttgtgggtaggctctcgcaagag
gaattaatggatcaattgtcttcttttttgcctgcggtttttgaagcatttgggaaccaa
agcgcagatgtccgaaagacagtggtgttctgtctagtagacatatatataatgcttggg
aaagcattcttgccgtatttggaaggtctaaacagtacacaggttcgcctagtgaccatc
tacgcaaacaggatctcacaggctagaaccggtgcccctatcgacccagacacctaa
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