Brassica napus (rape): 111212405
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Entry
111212405 CDS
T04128
Name
(RefSeq) methionine--tRNA ligase, chloroplastic/mitochondrial
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
bna
Brassica napus (rape)
Pathway
bna00450
Selenocompound metabolism
bna00970
Aminoacyl-tRNA biosynthesis
bna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
111212405
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
111212405
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bna01007
]
111212405
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
111212405
Enzymes [BR:
bna01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
111212405
Amino acid related enzymes [BR:
bna01007
]
Aminoacyl-tRNA synthetase
Class I (U)
111212405
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
111212405
Prokaryotic type
Other AARSs
111212405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
Anticodon_1
Toprim
Motif
Other DBs
NCBI-GeneID:
111212405
NCBI-ProteinID:
XP_022569669
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Position
C8:complement(37734813..37738127)
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AA seq
609 aa
AA seq
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MAARLNTSLQNTLSLLNPFNTLLTKKPFSSRNSFRFSKKLPSSPRRALYCTSTLESHDNA
ETFVLTTPLYYVNAPPHMGSAYTTIAADSIARFQRLLGKKVIFITGTDEHGEKIATSAAA
NGRNPSEHCDLISQSYRTLWKELDIAYDKFVRTTDPKHEAIVKEFYDRVFANGDIYRADY
EGLYCVNCEEYKDEKELLENNCCPVHQMPCVARKEDNYFFALSKYQKPLEEVLSQNPRFV
QPSYRLNEVQTWIKSGLRDFSISRALVDWGIPVPNDDKQTIYVWFDALLGYISALTEDNE
QQNLDTAVSLGWPASLHLIGKDILRFHAVYWPAMLMSAGLNLPKMVFGHGFLTKDGMKMG
KSLGNTLEPFELVQKFGPDAVRYFFIREVEFGNDGDYSEDRFIKIVNAHLANTIGNLLNR
TLGLLKKNCESTLVVDSTIAAEGVPLKDTVEKLVEKARTNYESLSLSTACEAVLEIGNAG
NSYMDQRAPWMLFKQGGVSAEAAAKDLVIILEVMRIIAVALSPIAPCLSLKIYSQLGFSV
DQFNSITWDDTKWGELKEGQVMAQASPVFVRIELDAAEKDEEEKKPKDSKKKGKAKVKAE
QQPQTIAEA
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaggttaaacacttcgcttcaaaacaccctctctttgttaaacccatttaat
actctcctcactaagaaaccattctcttcgagaaacagcttcagattctccaaaaagctc
ccttcttccccgaggagagctctctactgtacttccaccctcgaaagccatgacaacgcc
gagactttcgtcctcaccaccccgctttattacgtaaatgcccctccccacatgggcagc
gcttacaccaccatcgccgccgattcaatcgcccgtttccagaggctgcttggcaagaag
gttatctttatcaccggaacagatgagcatggtgagaagatagctacctcagcagctgct
aacggacgcaacccttccgagcattgtgatctcatttctcagtcttatcgaactctttgg
aaagaactcgatatagcttatgataagttcgtcagaaccactgatcctaagcatgaagct
atcgtgaaagagttctatgatcgagttttcgcgaacggggatatatacagagctgattat
gaaggtctttactgtgttaactgtgaggaatataaggatgagaaagagctgcttgaaaac
aattgttgccctgttcatcaaatgccatgtgttgccaggaaagaagataactacttcttt
gctctatcgaaatatcagaaacctcttgaagaagttttgtctcagaatcctcgtttcgtg
cagccttcctaccgtctaaacgaggtgcaaacatggataaagagtggcttaagggatttt
tcaatttctcgagcattagtagattgggggattcctgttcctaatgacgacaagcaaacc
atatatgtttggtttgacgctctactaggttacatatcagctctaacagaggacaatgag
caacaaaatctagacactgccgtttcattaggctggcctgcttcattgcatttgattggg
aaggatattctaaggtttcacgctgtctattggcctgctatgctaatgtctgctggtctg
aaccttccaaagatggtgtttggtcatggatttctcacaaaggatggaatgaagatgggg
aaatcgttggggaacactctagaaccttttgagctggttcagaaatttggaccagatgct
gttaggtacttcttcatccgggaggttgaatttggaaacgatggggactactcagaagac
cgttttataaaaattgtcaatgcacatctcgccaacacaataggaaacctcctaaaccgt
actcttggccttctcaagaagaactgtgagtccactttagtagtagattccaccattgca
gccgaaggagttcctttgaaagacacagtagagaagctggttgaaaaggcacggacaaac
tatgagagcctgtcattatcaacggcgtgtgaggctgtgttagagattgggaatgcggga
aactcctacatggatcaaagagcaccttggatgcttttcaaacaaggtggtgtctcagca
gaagctgcagccaaggatctggtgattatactggaagtaatgagaatcatagcggttgcg
ttatcccccattgctccttgtttaagcctgaagatatattcacagcttgggttctcagtt
gatcagttcaatagcataacatgggatgataccaagtggggagagctaaaggaaggtcaa
gttatggcgcaagctagtcctgtttttgtaagaatcgagctggatgcagcagagaaagat
gaagaggagaagaagccaaaggatagtaagaaaaagggtaaagctaaggtcaaagcagag
cagcaacctcagactatagcagaagcttaa
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