Brassica napus (rape): 111213254
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Entry
111213254 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP-like
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
111213254
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111213254
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111213254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4
zf-ANAPC11
zf-RING_11
zf-C3HC4_2
DUF4200
zf_RING_Vps8
FIMAH
zf-RING_16
RINGv
DUF4315
zf-C3HC4_3
zf-RING_Vps41
zf-UDP
Motif
Other DBs
NCBI-GeneID:
111213254
NCBI-ProteinID:
XP_022570683
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All DBs
Position
A9:complement(735837..739076)
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AA seq
517 aa
AA seq
DB search
MTSEGVHSKTQIVIIGTNWARVSGEMAGENAAASAICSICYEDLKPAAENLQSISACGHV
FHELCLQQWFEYCPSTNKRNCPICKQKCYLKDPFRLYFQSSGNQIESQKVGGIEEDPVVL
RGEVKRLEGKMQNLTSALEEQKKVNVEVSDQLHQCKEKLKEDKVKRVEAMQEVSTNQRLL
KLKSEECVQLTSKCTQLQDRTMALAKELASLKLVSDISLEEDDVLKLALLGNNAKTKDTI
DTLVKSLVIRNRSYKELLAKCNQLGRGEARSSEKLEKALEKMDKLKKRVRELEMITEESG
NRAIRDIIKASKPATESLDRISKPLGKLEKNDGFTNHGSCFSGREDSFFGKRESVIVVDD
DVHEATFSGIRHSDSTMKDEKGEDSNVQERRDDPVIKDIKFNIREGSTPSDSPCNNGAGG
SWLSSVENQNLRRWSKQGDRNKSLHSLGGSVSGKDDLISVGPDGKGGRIKVLRSKPQFSN
PNASSGSGKRFKIGTKTSGTSSQGCLQIEHFFGKPNR
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtgaaggtgttcattcaaaaacccaaatcgttatcatcggaacgaactgggcc
cgagtttctggagaaatggccggcgaaaacgcggcggcgagtgctatctgttcaatctgc
tacgaagatctcaaaccggcggctgagaatcttcaatcgatctccgcctgcggccacgtc
tttcacgagctatgtttgcagcagtggttcgagtactgcccgagcacgaacaagcgaaac
tgtccgatctgcaagcagaagtgttatctgaaggatcctttccgcctttactttcaatct
tccgggaatcaaatcgaatctcagaaggttgggggaatcgaggaagatccggtggtgctg
agaggtgaagtgaagcggctcgaagggaagatgcagaatcttacttcggctctggaggag
cagaagaaggtgaatgttgaagtctccgatcagttgcatcaatgtaaggagaaactgaag
gaggacaaagtaaaaagggtggaggctatgcaagaagtatcaacgaaccaacgcttactt
aaactaaaatcagaggaatgtgttcagcttacttctaagtgcactcagctacaagacaga
actatggctcttgccaaggagctcgcatcgcttaaactagtttcggatataagcttggag
gaagatgatgtactgaagctagcgttgttgggaaataacgcaaagacaaaggatacaata
gacacacttgtcaagtccttggttatccgaaacaggagttacaaggagttgctagccaaa
tgcaatcagctgggcagaggcgaagctcgatcttctgagaaacttgaaaaagctttggaa
aagatggataaactaaagaagcgagtgagggaacttgagatgataactgaagagagtggg
aacagagcaataagggatataataaaagcttccaagcctgcaactgaaagcttggataga
atctctaaaccacttggtaagttggagaagaatgatggcttcaccaatcatggatcatgc
tttagtggaagagaagactccttttttggcaaacgggagtcggttatagtggtagatgat
gatgttcacgaagccaccttttctggcatcagacattcagattctactatgaaagatgag
aagggtgaggatagtaatgttcaggagagacgtgatgatccggtgatcaaggacataaag
ttcaacatcagagaaggctcaacgccatcagactcaccgtgcaacaatggtgctggaggc
agttggttgtcaagtgtagaaaatcaaaatctcagaagatggagcaaacaaggagataga
aacaaatcccttcattcactaggaggttctgtctcaggcaaggatgatttgatctctgtt
gggcctgatgggaaaggtggaagaatcaaagtgttgagatctaaaccccaattttctaac
cccaatgcaagctcaggaagtggtaagagattcaagattggaactaaaacaagtggtacc
tcctctcaagggtgtctgcagatcgaacacttttttggaaaacccaatcgctaa
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