Brassica napus (rape): 111213441
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Entry
111213441 CDS
T04128
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z33
KO
K12896
serine/arginine-rich splicing factor 7
Organism
bna
Brassica napus (rape)
Pathway
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111213441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
111213441
Spliceosome [BR:
bna03041
]
Common components
Common spliceosomal components
SR proteins
111213441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_5
zf-CCHC_2
CLIP1_ZNF
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
111213441
NCBI-ProteinID:
XP_022570916
LinkDB
All DBs
Position
C3:complement(12077429..12080066)
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AA seq
293 aa
AA seq
DB search
MPRYDDRYGNTRLYVGHLSSRTRTRDLERLFNRYGRVRDVDMKRDYAFVEFSDPRDADDA
RHYLDGRDFDGSRITVEFSRGAPRGSRDYDSRGPPPGAGRCFNCGVDGHWARDCTAGDWK
NKCYRCGERGHIERNCKNSPKKLRRSGSYSRSPVRSRSPRRRRSPSRSRSLSRSRSYSRS
RSPVKRRERSEEERSRSPKRMEDSLSPRGRDRSPIMDDEGSPRIIDGSPPPSPKLEKPAG
SDHDGGSSPQDNGNGRNTVASPVVGRDSPREDRSPVDDDYEANRASPRGSESP
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcctagatatgatgatcgttacgggaacactcgtctgtacgttggacacttatcatcc
agaactcgtaccagagaccttgaacgccttttcaacagatacggaagagtgcgagatgtg
gatatgaagcgggattatgcttttgttgagtttagtgatccccgtgatgctgatgacgcg
agacattacttggatggaagagactttgacggaagtcgcatcaccgtggagttttcaaga
ggggcacctcgtggctctcgggattatgacagcagaggcccacctcctggagcaggtcgc
tgctttaactgtggtgttgacggtcattgggcccgagactgcactgcaggagactggaag
aacaagtgttaccgctgtggtgaaagaggacatattgagagaaactgcaagaacagtccc
aagaagctcaggcggagtggaagctactccaggtcacctgtaagatcccgttctcctcgt
cgtagaagaagcccgagccgtagcaggagtcttagccgtagccggagctacagccgatca
agatcccctgtgaaaagaagagagagaagtgaagaggagaggtctcgcagtccgaagaga
atggaggactctctatcgccaagaggcagagaccgtagtccgattatggatgatgaaggt
agcccaaggattatagacgggagccctccaccttctccaaagcttgaaaagccagcagga
tcagaccatgatggtggtagcagccctcaagacaatgggaatggcagaaacactgttgcc
agtcccgttgtgggacgtgacagtccgagagaggacagaagccccgttgatgatgattac
gaggccaaccgtgcttcccctagaggaagcgagtcaccttga
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