Brassica napus (rape): 111213578
Help
Entry
111213578 CDS
T04128
Name
(RefSeq) syntaxin-43-like
KO
K08489
syntaxin 16
Organism
bna
Brassica napus (rape)
Pathway
bna04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
111213578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
111213578
Membrane trafficking [BR:
bna04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
111213578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Prominin
Syntaxin_2
FlxA
MCPsignal
EF-G-binding_N
CAMP_factor
Motif
Other DBs
NCBI-GeneID:
111213578
NCBI-ProteinID:
XP_022571094
LinkDB
All DBs
Position
A5:complement(27447421..27449904)
Genome browser
AA seq
317 aa
AA seq
DB search
MATRNRTLLFRKYRNSLRSVRAPMTESKSGVGPVIEMASTSLLHPKRSYTPVSTEDPGTS
SKGAVTVGLPPDWVDVSEEISVNIQRARTKMAELGKAHAKALMPSFGDGKEDQHQIESLT
QAVTFLLRKSEKQLQRLSKGGPSEDSSVRKNVQRSLATDLQQLSMELRKKQSTYLKRLRL
QKEDGGDLEMNLNGSSSRAEDDDFDDILFSEHQMSKIKKSEEISVEREKEIQQVVESVNE
LAQIMKDLSALVIDQGTIVDRIDYNIQNVSSTVEDGLKQLQKAERTQRSGGMVKCASVLV
ILCFIMLVLLILKEIIF
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcggaaccgcacgctcttgttcagaaagtacagaaactctctgaggagcgtc
cgtgctccgatgacggaatcgaaatccggcgtaggcccggtgatcgagatggcgagcaca
tctctattgcatcccaaacgctcctacactccagtcagtaccgaagatccagggacctca
agtaaaggagcagtgacagtggggttaccaccggattgggttgatgtctccgaggagatt
tcggtgaacattcagcgcgcgaggaccaaaatggctgagcttgggaaggctcatgctaaa
gctttgatgccttcgtttggggacggtaaagaggatcagcatcagatcgagtctttgacg
caggcggttactttcttgttgaggaaatcggagaagcagcttcagaggctttctaaaggt
ggaccttctgaggattcgagtgttaggaagaacgtgcagcggtctcttgcaactgatctc
caacaactttccatggagctacgcaagaaacagtctacttatttgaaacgcttgaggcta
caaaaagaggatggaggggatttagagatgaatctaaacggaagcagttctagagcagaa
gatgatgacttcgatgatatattatttagtgagcatcagatgagcaagatcaaaaagagc
gaggaaatatctgtagagagggagaaagagattcagcaggttgttgaatccgtaaacgag
ctcgctcagataatgaaggatctttctgcgcttgtgatagaccagggtacgatagttgat
cggattgactataacatccagaacgtttctagtacagttgaagatggtctcaaacagctg
caaaaggcagaacgtacacagagaagtggaggcatggttaaatgtgcgtctgttcttgtc
atcctctgtttcatcatgcttgttctcttaatccttaaggagattatcttctga
DBGET
integrated database retrieval system
