Brassica napus (rape): 111213586
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Entry
111213586 CDS
T04128
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111213586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
111213586
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111213586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
OB_RNB
Motif
Other DBs
NCBI-GeneID:
111213586
NCBI-ProteinID:
XP_022571101
LinkDB
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Position
C4:56630858..56632648
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AA seq
391 aa
AA seq
DB search
MESDQGKLFIGGISWDTDENLLREYFSNYGEVLQVTVMREKATGRPRGFGFVSFSDPAVI
DRVLQSKHHIDNRDVDVKRAMSREEQSPGGSRPGGSFNAASRSFDSGANVRTKKIFVGGL
PPALTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLNG
KQVEVKRALPKDANPGVVGGGGGGGFSGYGGGGYEGRVDSSRYMPPQNAGSGYPPYGGSG
YGTTGYGYGSNGVGYGGFGGYGNPSGAPYGNPGVPGAGFGSGPRSSWGGQAPSGYGNLGY
GNAPAAPWGGSGGPGSAVMGQGGASAGYGYGANDSSYGAPSGYGAIGGRPNSLGGGYADV
SDGSGGYGNHQGNGQGGYGGGYGSGNQALQQ
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggaatcagatcagggaaagctcttcatcggcgggatttcatgggacaccgacgagaat
ctcctgagagagtacttcagcaattacggagaggttttgcaggtgacggtgatgcgagag
aaagctacaggtcgtccgagaggattcggattcgtttccttctccgatcccgccgtcatt
gatagggttcttcagagcaagcaccatatcgataacagagatgttgatgtgaagagagca
atgtctagagaagagcagagtcctggtggtagtagaccagggggtagttttaatgctgcg
tctaggagttttgatagtggagctaacgtgaggaccaagaagatattcgtgggaggtttg
cctcctgcgttgacatcagatgagtttagagcctacttcgagacttacggccccgtgagc
gatgcggtgattatgattgaccagaccacgcaacgtcctagaggttttgggtttgtttcg
ttcgattctgaagattctgttgaccttgttttgcacaagactttccacgatttgaatggg
aagcaagtagaagttaaaagagctcttcctaaagatgctaatcctggagttgttggaggt
ggtgggggtggtggtttctcgggatatggtggaggtggatacgagggtcgtgttgattcc
agtagatacatgccgcctcaaaacgctggaagcggttatcctccttacggtggttctggg
tatggtactactggttatggttatggaagcaacggtgtgggttatggagggtttggaggg
tatgggaatccatctggtgcgccttatgggaaccctggtgtccctggagctgggtttgga
agtggtccaagaagttcttggggaggtcaagcgccgtctggttacggtaacttgggatat
ggaaatgctcctgctgctccgtggggcggttctggtggtcctggttcagcagtgatgggt
caaggaggtgcatctgcaggttatggatatggtgcaaatgattcctcttatggagctcca
tctggttatggtgcaatcggtgggcggcctaacagccttggcggtggctatgctgatgtt
tcagatggctctggaggatatgggaatcaccaagggaacgggcaaggtggttatggtgga
ggttatgggagtggtaatcaagctttacaacagtga
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