Brassica napus (rape): 111214264
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Entry
111214264 CDS
T04128
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit E-like
KO
K07466
replication factor A1
Organism
bna
Brassica napus (rape)
Pathway
bna03030
DNA replication
bna03420
Nucleotide excision repair
bna03430
Mismatch repair
bna03440
Homologous recombination
bna03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111214264
03420 Nucleotide excision repair
111214264
03430 Mismatch repair
111214264
03440 Homologous recombination
111214264
03460 Fanconi anemia pathway
111214264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
111214264
03032 DNA replication proteins [BR:
bna03032
]
111214264
03400 DNA repair and recombination proteins [BR:
bna03400
]
111214264
Transcription factors [BR:
bna03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111214264
DNA replication proteins [BR:
bna03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
111214264
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
111214264
MMR (mismatch excision repair)
111214264
DSBR (double strand breaks repair)
HR (homologous recombination)
111214264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
111214264
NCBI-ProteinID:
XP_022572526
LinkDB
All DBs
Position
C7:complement(48039265..48042037)
Genome browser
AA seq
812 aa
AA seq
DB search
MGEILTAGVIEMIRNDRVKNHEQMKPVLQVTELKLFTAQQEPSKERIRVLLSDGTAFIQG
MLGVALNPLVKDGVLQPGSILRLDHFVCSEIQKKKIVVIAQLEVITTKSDIIGDHARGRK
ATEQHGGDSGNTSYEQHGRTDVSSARQINSTETGTSLVGQQRQQAFGSGSGSSFEQHGRS
DLSGGRQINNNGTATSHAGIGQQRQQVYGSGSSLPGSAPPSARSYNNPSTGLVRDPPPTY
PLQRHQPPPPMYQNRGPVARNEAPPRIIPINALNPYSGRWTIKARVTSKGDLRTYNNPRG
GGKVFSFDLLDADGGEIRVTCFNAVADQFFDQIVVGNLYLISRGNLRPAQRKFNHLPNDY
EISLDNVSTVQQCHEEDAAIPQNQYNFRPIGDIESMETNSIIDVIGVVSSISPTGTIMKK
TGTETQKRSLQLKDMSGRSVEVTMWGSFCNAEGQKLQSLCDSGEFPVLAVKAGRVSEFNG
KAVSTIGSSQLFVEPDLAEAQKLKEWFAREGRSAPCISISREFTGGGRVDVRKTISQIKD
EKLGTSEKPDWITVNATIIYMKVDNFYYTACPLMNGDRQCNKKVTDNGDGTWRCEKCDKC
VDECDYRYILQLQLQDHTGLTWVTAFQEAGEEIMGMPAKDLYYVKHEHNDEEKFEDIIRK
VAFTKYIFKLKVKEETYGDEPTVKATVVKVDKVNYSSDTRTILDAMEKLRTAEAGSSGVG
TSGTRDVSSVERREFGLPANQSDQYGNQSSNGARPHGGGGAMSCDVCGNTGHVSANCPNT
RSGPQGQYMGGGSYGGSGSYGGGLPRQHVGSY
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgggggagattctgacggcgggggtaatcgagatgataagaaacgatagagtgaagaac
catgaacagatgaagccggttcttcaagtgacggaattgaagctgttcacggctcagcaa
gaaccgtccaaggagaggattagggtcttgttatcagacgggacggcctttattcagggg
atgctgggggttgctctcaaccctcttgttaaagatggggttcttcaacccggttccatc
cttaggctcgatcatttcgtctgtagtgagatccagaagaaaaagattgttgttattgcg
caattggaagtgattacaacgaagtctgatattattggagatcatgcacgagggcgaaag
gctactgaacagcatggaggagactctggtaacactagttatgagcaacacggtaggact
gatgtgagtagtgctcgtcaaatcaacagcaccgagacagggacaagtcttgttggtcaa
cagagacaacaagcgtttggttctggttctggttctagttttgagcaacatggtaggagt
gatttgtctggtggtcgtcaaatcaacaacaacgggacagcgacgagtcatgcaggtatt
ggccaacagagacaacaagtgtatggttctggttctagtctacctggatcagcaccacct
tctgctcggtcctacaacaatccatctacaggtcttgtgcgtgaccctccacccacttat
cctctccagcgccaccagccaccaccaccaatgtatcagaacaggggaccagtggcgagg
aacgaggcacctcctaggatcattcccatcaatgctcttaacccttactcaggcaggtgg
accatcaaagccagggtcacgagcaaaggagatctcaggacttacaacaacccacgcggc
ggtgggaaagtgttcagcttcgatcttctcgacgctgatggtggagagataagagtcact
tgcttcaacgccgttgctgaccagttctttgaccagatcgtcgtcggcaatctttaccta
atctcaagggggaacctccgtcccgctcagaggaagttcaaccatctccctaacgactac
gaaatctcgctggacaacgtgtcaacggtacagcaatgccacgaggaggacgctgccatc
cctcagaatcaatacaacttccgtcctataggtgatatcgagagcatggagactaacagc
atcatcgatgtgattggcgttgtctcgtccatcagccccactggaacaataatgaagaaa
acgggtaccgagacgcagaagagatctcttcagctgaaggacatgtctggtcgaagcgtt
gaggtaaccatgtggggcagcttctgcaacgcagagggacagaagctgcagagtctctgc
gactctggtgagtttcctgttcttgcagttaaggcggggagggtcagcgagtttaatggt
aaggcggtgagcaccattgggtcaagccagctcttcgttgagccagacctcgctgaagct
cagaagcttaaggaatggtttgctagagaaggaaggagcgctccttgcatctccatatcg
agagagttcaccggtggcggcagagtagatgtccgcaaaacaatctctcaaatcaaagac
gagaagctagggacatcggagaagcctgactggatcacagtcaacgccactattatatac
atgaaggtggacaacttctactacacggcttgtcctctcatgaacggtgatcgtcagtgc
aacaaaaaggtgactgataacggagacgggacgtggcggtgcgagaagtgtgataagtgc
gtggatgagtgtgactacaggtatatactgcagctccagttgcaggaccatacaggtctg
acttgggtcacagcgtttcaagaggctggtgaggagataatggggatgcctgctaaagat
ttgtattatgtgaagcatgagcacaatgatgaggagaagtttgaagatatcatccgtaag
gttgcttttaccaaatacatcttcaagctgaaggttaaagaagagacgtatggggatgaa
cctactgtgaaagcaacggttgtgaaagtagacaaggtaaactactcatcagataccagg
actattctagatgctatggagaaactcaggaccgctgaggctggcagctctggtgttgga
acctcaggaacaagagatgtctcatcagtggaaagaagggagtttggtttacctgcaaac
caatcagatcaatatgggaatcagtctagcaatggcgctaggcctcatggtggtggtggt
gctatgagctgcgatgtctgtggaaacacgggtcatgtttctgcaaactgtccaaacact
aggagtgggcctcaagggcagtacatgggtggaggatcttatggaggctcggggagttat
ggaggaggactaccaaggcaacatgttggaagctactga
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