Brassica napus (rape): 111214285
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Entry
111214285 CDS
T04128
Name
(RefSeq) protein FIZZY-RELATED 2
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
bna
Brassica napus (rape)
Pathway
bna04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111214285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
111214285
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
111214285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_Gbeta
ANAPC4_WD40
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
eIF2A
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_RIG_1st
Beta-prop_HPS5
Beta-prop_WDR41
NBCH_WD40
Tricorn_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_Vps41
WD40_RFWD3
Peptidase_M10_C
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
MIOS_WD40
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
111214285
NCBI-ProteinID:
XP_022572572
LinkDB
All DBs
Position
A3:25489384..25492806
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AA seq
470 aa
AA seq
DB search
MEDPTASNATPPTNSSPQLSPPPSMNTPIISLESRINRLINANQSPSPSRSIYSDRFIPS
RSGSNYALFDLAKDGKEDGAGSYATLLRAAMFGPETPEKRDITGFSTSRNIFRFKTETNR
RSDSFSPFVSDDGPGVSQSPIKALRKVSRSPYKVLDAPALQDDFYLNLVDWSAQNVLAVG
LGNCVYLWNASSSKVTTLCDLGADDSVCSVGWNFRGTHLAVGTSNGKVQIWDASRCKRTR
TMEGHRLRVGALAWSSSVLSSGSRDKSILQRDIRCEEDHVSKLTGHKSEVCGLKWSYDNR
ELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVHGLLASGGGTADRCIRFWN
TTTNTHLSSIDTGSQVCNLAWSKNVNELVSTHGYSQNQIIVWKYPTMSKVATLTGHTYRV
LYLAVSPDGQTIVTGAGDETLRFWNVFPSPKSQNTDSEIGSTFFGRTTIR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcctaccgcaagcaatgcgactcctccgacgaattcttctccccaactcagt
ccaccaccgtcgatgaacactccgatcatctcactcgagtcacgaatcaaccgtttgatc
aatgccaaccaatctccatcgccatcacggtctatatactctgatagattcatccccagt
agatccggatccaattatgctctcttcgatctcgctaaagacgggaaagaagacggagct
ggctcttacgcgactctgttacgcgcggcgatgtttggacccgagacgccggagaagaga
gacatcactgggttctctacgtcgcggaatatatttcggtttaagacggagacgaatcgg
cgttcggattcgttttcgccgtttgtgtctgatgatggtcctggtgttagtcagagtccg
atcaaggccttgaggaaggtgtcgcgatcgccctataaggtactagatgcaccggctttg
caagatgatttttatttaaatctggtggactggtcagcgcagaatgttcttgcggtggga
ctagggaactgcgtgtatttgtggaatgctagtagtagcaaggttaccacgctatgtgat
ctaggggctgatgatagtgtttgctcagtaggttggaacttccgtggaactcatctggct
gttggaactagtaacgggaaagtacagatatgggatgcgtcgcggtgcaagaggacaaga
acaatggaaggacatcgtctaagagttggagcactggcatggagctcatctgttctttca
tctggtagcagagacaagagtattcttcaaagagacatacgttgcgaagaagatcatgtc
agtaaactcacaggtcacaaatccgaagtatgcggactcaagtggtcttacgataacaga
gagttagcatctggtggaaacgacaataggctttttgtatggaaccaacattcaacacaa
ccggtattgaaatatagtgaacacacagcagcggttaaagcaattgcttggtctcctcat
gttcacgggcttcttgcttctggtggtgggactgctgatagatgcatacgtttttggaat
acaaccacaaatactcatttgagttccatagatactggcagtcaggtatgcaatctagct
tggtctaaaaatgtaaacgagctggttagcacgcacggatactcccaaaaccaaatcata
gtctggaaatacccaaccatgtccaaagttgcaactttaaccggtcacacataccgtgtt
ctgtaccttgcggtctcacctgatggacagacgattgtaacaggagcaggagatgaaacc
ttaaggttctggaatgtcttcccatccccaaaatctcagaacacggatagtgaaatcggt
tcaacattctttggtagaacaacaataaggtga
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