Brassica napus (rape): 111214306
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Entry
111214306 CDS
T04128
Name
(RefSeq) protein FIZZY-RELATED 3-like
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
bna
Brassica napus (rape)
Pathway
bna04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111214306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
111214306
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
111214306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WDR55
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR41
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_RIG_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_VPS8
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
111214306
NCBI-ProteinID:
XP_022572669
LinkDB
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Position
A3:complement(2496554..2499067)
Genome browser
AA seq
486 aa
AA seq
DB search
MESPQKTKTGLNLPAGMNQTSLRLETFSSSFRGISTLSSPSKSTCSDRFIPCRSSSRLHA
FDLQDKEPTTPVKEGGNEAYSRLLKSELFGSDFVSNSLSPAGGGGGQGGSASSPMSPCTS
NMLRFKTDRSNSSPCSPFSPSILGNDNGLSSDSSPPPKPPRKVPKTPHKVLDAPSLQDDF
YLNVVDWSSQNVLAVGLGTCVYLWSASNSKVTKLCDLGPNDSVCSLQWTREGSYISVGTS
HGQVQVWDGTQCKRVRTMGGHQTRTGVLAWNSRILSSGSRDRNILQHDIRVQSDYVSKLV
GHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPIHKLTEHTAAVKAITWSPHQSSL
LASGGGTADRCIRFWNTTNGHQLNSIDTGSQVCNLAWSKNVNEIVSTHGYSQNQIMLWKY
PSMAKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNVFPSVKMQTPVRDTGLWSL
GRTQIR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggaatccccacagaaaaccaaaaccggtttaaacctccccgcggggatgaaccagacc
tctttacgtctcgagacgttctcgagctcgttccgcgggatctcgaccttatcctccccc
tcaaaatccacctgcagcgacagattcatcccctgcagatcctcatcgcgtctccacgct
ttcgatctgcaggacaaggagccgacgacgccggtgaaagagggagggaacgaagcgtac
tcgagactcttgaaatctgagcttttcggatctgatttcgtttctaactctttgtctcct
gcaggtggtggtggtggtcaaggaggatctgcttcttctccgatgagtccgtgtactagt
aacatgttgaggttcaagacggatcgttccaactcgagtccttgttcgccgttctctcct
tcgattctgggaaacgataatggtctctctagtgattcgtctcctcctcctaagccgcct
cgcaaggttcctaaaactcctcacaaggtgttggatgcaccttcattacaagatgacttc
tacttgaacgttgtggactggagctcacagaatgttcttgccgtggggcttggtacttgt
gtctatctctggagtgcttccaatagcaaagtgacgaagctatgtgacttgggacctaat
gatagcgtgtgttcgcttcagtggacacgtgagggttcatatatatctgttggtacaagt
cacggtcaagttcaggtttgggatggaacacagtgcaagagagtccgaacaatgggaggt
catcaaacgagaactggtgtcttggcatggaactcgaggatcttatcctcagggagcaga
gacagaaacatcctccaacatgatatccgagtccagagcgactacgtcagcaagctcgtg
ggacacaaatctgaagtctgcgggctgaaatggtctcatgatgatagagagcttgcgtct
ggaggcaacgataatcagttgttagtgtggaacaatcattcacaacaacctattcataag
ctgactgagcatacagcagcggttaaggcgattacatggtctcctcatcagagcagtctc
cttgcttcaggaggtggaaccgcagacagatgcattagattctggaacaccacaaacgga
catcagttgaacagcattgacactggaagccaagtctgcaatctggcgtggagcaagaat
gtcaatgagatagtgagcactcatggatactctcagaaccaaatcatgctctggaagtat
ccatccatggcaaaggttgcaacgcttacagggcacagtatgagagtactttacttggct
acatcacctgatggacagactatagtgactggagcaggagatgagaccctgcggttttgg
aatgtcttcccttcagtgaaaatgcagacaccggtgagggacacaggcctctggtcatta
gggaggacacagatccgataa
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integrated database retrieval system