Brassica napus (rape): 111214314
Help
Entry
111214314 CDS
T04128
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
bna
Brassica napus (rape)
Pathway
bna03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111214314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
111214314
03036 Chromosome and associated proteins [BR:
bna03036
]
111214314
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111214314
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111214314
PBAF complex
111214314
GBAF(ncBAF) complex
111214314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
YEATS
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
111214314
NCBI-ProteinID:
XP_022572675
LinkDB
All DBs
Position
A3:complement(2577400..2579670)
Genome browser
AA seq
503 aa
AA seq
DB search
MSGNNNNPQGSAPSPFRSPGMMPSASVPGGFAQSHIATNFQAPFQFTQAQAMAQAQSKVH
AQMQAGMGINQAQAPQEIGGLGQSSSPSMTTPGSSSNVKRLMRPPSGFPNNTVSPMRTME
LTPAARKKKQKLPEKSLQERVAAILPESELYTQLLEFESRVDAALSRKKVDIQEALKNPP
CVQKTLRIYVFNTFANQNNNPNADPATWTLKIVGRILEDGVDPETTNPLHPKFSSFFKKV
QVSLDQRLYPENPLITWENSRSPAPQEGFEIKRKGNQEFAATIRLEMNYVPEKFKLSTAL
MDVLGIEVETRPRIIAAIWHYVKARKLQSPNDPSFFNCDAALQKVFGEQKLKFTMVSQKL
SHHLSPPPPIHLEHKIKLSGSSPAVSACYDVLVDVPVTIQRDLSNLLANAEKNKEIEACD
EAICAAIRKIHEHRRRRAFFLGFSQSPAEFVNALMESQSKDLKVVAGEASRNAERERGSD
FFNQPWVEDAVIRYLNRRPARGN
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtaacaacaataatcctcaaggctctgcgccttcgccgttcaggagccctggg
atgatgccctctgcgtctgtccctggaggctttgctcagtctcatatagcaactaacttc
caagctccgtttcagttcactcaagctcaggccatggctcaagcacagtctaaagttcat
gcacagatgcaagcaggcatggggataaaccaagctcaagccccccaggagattggtggt
ttgggtcagtcttcttcaccttctatgaccactcctggaagtagttcaaacgtgaagagg
ttaatgagacctccttctggtttccctaacaacactgtctcccccatgagaacaatggag
ttgacccctgccgcacggaagaagaaacagaagcttcctgaaaagtccttgcaggaacgt
gtggcggcgatcttgcctgagtctgagttatacacgcagcttcttgagtttgagtctcgt
gttgatgctgcgttgagtagaaagaaggttgacatccaggaagctctcaagaaccctcct
tgcgtacagaagacgcttaggatctatgtgttcaacacgtttgctaaccaaaacaataat
ccaaacgctgaccctgcaacatggactcttaagattgttggtaggatcctggaagatggg
gtggatccggagactactaacccattgcatcccaagttctcgtctttcttcaagaaggtt
caagttagccttgatcagaggctgtaccctgagaacccgttgatcacatgggagaactct
cgttcacctgctcctcaggaagggtttgagataaagaggaaagggaatcaggagtttgca
gctactattcgtttggagatgaactacgtccctgagaagttcaagctctctactgcgttg
atggatgttcttgggattgaggttgaaaccaggccaagaatcatcgctgcaatttggcac
tacgtcaaggcgaggaaactgcagagcccaaacgacccttctttcttcaactgtgacgct
gcgcttcagaaagtgtttggggaacagaagttgaagttcacaatggtctctcagaagtta
tctcatcacttgtcacctccaccaccgattcacttagaacacaagatcaagctgtcggga
agtagcccggccgtatcagcgtgttacgatgtcctagtggatgtacctgtcactatccaa
agggatctgagcaacttgttggccaacgcagagaagaataaagagattgaggcttgtgat
gaagcgatatgtgcagccataaggaagatccatgagcataggaggagacgagcatttttc
ttggggttcagccaatcaccagctgaattcgtaaacgcgctgatggaatcgcagagcaag
gatctgaaggttgtagcgggagaagctagtcgaaatgctgagagagagcgtggatcagac
tttttcaaccaaccttgggtcgaagatgcagtgatacgttacttgaaccggaggccagca
agggggaactag
DBGET
integrated database retrieval system
