Brassica napus (rape): 111214361
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Entry
111214361 CDS
T04128
Name
(RefSeq) DNA mismatch repair protein MLH3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
bna
Brassica napus (rape)
Pathway
bna03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111214361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bna03400
]
111214361
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
111214361
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
HATPase_c_3
DNA_mis_repair
HATPase_c
Motif
Other DBs
NCBI-GeneID:
111214361
NCBI-ProteinID:
XP_022572819
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Position
A3:31019641..31025862
Genome browser
AA seq
1186 aa
AA seq
DB search
MKTIKPLPEGVRHSMRSGIIMFDMARVVEELVFNSLDAGATKVSIFVGVVTCSVKVVDDG
CGVSRDDLVLLGERYATSKFHDFTNVETASESFGFRGEALASISHISLLEITTKAVGRPN
GYRKVMKGSKCLHLGIDDDRKDSGTTVTVRDLFYNQPVRQKYMRSSPKKVLESITKCVFR
IALVHSDVSFSVLDIESDEELFQANPSASAFSLLMRDAGTEALNSLCKVDVTDGMLNVSG
YISGPRDSFKALQYIYINSRFVSKGPIHKLLNNFAASFDCTDDWKLTDGLQTGRRNRLQS
NPGYILCITCPRHLYEFSFEPSKTNVEFKNWEPILTLVERIVLANWKKDEGLEICDGGAD
LLAKGDRQDLTDGMGRLEKDAEWPESMEPTKKKLKRSNDETPSSFLFPPSADFKRDDGYL
SQGKEEWSPKYEFGMRIQNLKEQDTVAEFDRQTACLLQSRDTDMQKNDEFPQVTDFLETR
LVSGAKCSKQFLTRCQTSTPLNVNHGFMKDADVLNFQFEEVEDELDVSNCIGKHLLRGCS
SRESLALHEPNLSRGEGYESGMRMKLDDKRSNSLIHVLETREGGSYCDVLSDTHEIHGMT
RTPDCSLGSSWQDTDWFNPQHISDSTSVGIGEDFNINPVDIAEFRSYEDKFVKNRYSSSA
NVGRSGPGSYRLSSECSTVFSTSPSTAEWESDYQKGCQILEGSLKLGRMPDPGYFFSPAN
NFKFDHEAIPQIDCRKTSTDSFADMQNCTESGEKIFQSLWGHADNVGTEQHSTRTNKFSY
RYGSKNNVGKRRSRRSRSAPPFYQEKKRFVSLSCRSDTKLKNSDPSEPDDLECLTQPCNG
SILDDVSYDHLQEPGKSMSSASDLKASAGCSIVHSETRDEDGDEDLSSEENLDPVKSTTK
WRHNCPVPQVAKESHELHDEDSVLDICSGLLHLRSDESLVPESINRQSLEDAKVLQQVDK
KYIPIVTCGTVAIVDQHAADERIRLEELRKKVLAGEARTVTYLSANQELVLPEMGYQLLQ
SYSDQIREWGWICSINVEGSTSFKKSMSIIQRKPTPITLNAVPCILGVNLSDVDLLEFLQ
QLADTDGSSTIPPSVLRILNSKACRGAIMFGDSLLPSECSLIIEGLKQTSLCFQCAHGRP
TTVPLVDLKALHKQITKLEPRQPWHGFERREITLDRAKSRVDEAKS
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgatcaagcccttaccggaaggtgtccgtcactcgatgcgatccggaatcatc
atgttcgacatggcgagagtcgtggaggagctcgtcttcaacagtctcgacgctggtgcg
accaaggtgtctatcttcgtgggtgttgttacatgctctgtgaaggttgtcgatgatgga
tgtggcgtttccagagatgatttggttttgttgggagaaagatatgctacgtcaaagttt
cacgactttacaaatgtggagacagccagtgaaagttttggattcagaggagaggcctta
gcttcgatatcacatatctcgttgctggaaatcacgactaaagctgttgggaggcctaat
ggttatcggaaggttatgaagggatccaagtgtctacatctaggaattgacgatgataga
aaagactctggcacgactgtaactgtccgagatctgttttacaatcaaccagtgagacaa
aaatatatgcgatccagccccaagaaagtgttggaatctataacaaagtgtgtgttccgg
attgcgcttgtgcactcggatgtttccttcagtgttcttgatatcgaaagtgatgaagag
cttttccaagccaatccttctgcttcagcattttctttactgatgagagatgcagggacc
gaagctttaaactctctttgtaaagtagacgttacagatggcatgttgaatgtctctggg
tatatatctggtccgcgagatagtttcaaggctttgcagtatatatatatcaattcaaga
ttcgtaagcaaaggtcccatacataagctgctgaacaacttcgctgctagttttgattgt
acggatgactggaagcttacagatgggctacaaacaggacgacgtaacagacttcaatcc
aatcctggttacatattgtgcataacatgtccacgtcatctttatgaattctcatttgaa
ccatcaaagacaaacgtcgagttcaagaactgggaacctatacttaccttggtagaaaga
atcgttctagccaactggaagaaagatgaaggtcttgaaatttgtgatgggggagctgat
ctactggcaaaaggtgatagacaagacctgactgatggcatgggtagacttgaaaaagat
gcagagtggccagaatctatggaacctacaaaaaagaagctcaagagaagtaatgatgag
acaccttctagttttctctttcccccgtctgctgactttaaaagagatgatggttatttg
tcgcaaggaaaggaggaatggtctccaaaatatgaatttggaatgagaattcagaatctt
aaagagcaagacactgtagccgaatttgaccgtcagactgcttgtcttctacagtcacgt
gacacagatatgcaaaagaatgatgagtttccacaagttactgacttcctagaaacaaga
ttggtttctggcgctaagtgcagcaaacagtttctaacaagatgccaaactagcacacct
ctcaatgtcaaccatggttttatgaaagatgcagacgtattgaattttcagtttgaagaa
gttgaagatgagttggatgtcagcaattgcattggaaagcatcttttgcggggttgctcc
tcaagagaaagcctagcccttcatgagcctaatctatctcgtggtgaagggtatgaatca
ggcatgcgtatgaaacttgatgacaaacgaagtaattcactgattcatgtcctagagacc
agagaaggtggttcttactgtgatgttctttccgatactcatgaaattcatggaatgacc
aggactcctgattgttccctagggagttcatggcaggatactgattggtttaatccacaa
catatctcagatagtacaagcgttggaattggagaagattttaacatcaaccccgtagat
attgcggaatttcgttcttatgaagacaaatttgtgaagaataggtactcttcctcagcc
aatgtcgggaggtctggtcctggtagttaccgtttgagttctgagtgctctacagtgttc
tccacatctccttctacggccgagtgggagtctgattatcagaaaggttgtcaaattctt
gaagggagtttgaaactgggaaggatgcctgaccctgggtattttttcagtccagctaac
aacttcaaatttgatcatgaggccatacctcaaatcgattgccgaaaaaccagcacagat
tctttcgcagatatgcagaattgcactgagtcaggtgaaaagattttccagtcattgtgg
gggcatgcagataatgtgggtactgaacaacatagtaccaggacgaacaaatttagttat
aggtatggttcaaagaataatgttggtaaacgaaggtcaagaagaagccgctctgctcct
ccattttatcaagagaaaaagagatttgtcagtttaagttgtagatcagacacaaaatta
aagaattctgatccatcagaacctgatgatttggagtgcttgacacaaccctgtaatggc
agcatccttgatgatgtgtcatatgaccacctacaagaaccagggaaaagtatgagttcg
gcctcagacttgaaagcatctgctggttgcagtattgtgcactcagagacccgagatgag
gatggagacgaagacttaagctctgaggaaaatctggatccagttaaatccacaacgaaa
tggcgccataactgtccggtccctcaggttgcaaaggaatcacacgagcttcatgatgaa
gatagtgtactcgatatatgttcaggacttttgcacctgcgatccgatgagtccttggtt
cctgaatctataaacagacagtcccttgaagatgccaaggttttacaacaagtggataaa
aaatatattccaattgttacttgtggaacagttgccatcgttgatcagcatgctgccgat
gaaagaatacgcttggaagagctgcgtaaaaaggtcctggcgggggaagcaaggacagtc
acctatttgagtgcaaaccaagagttggtcctaccagagatgggttatcagttactccag
agttactcagaccagataagagaatggggttggatctgcagcattaatgtagaagggtca
acgtcctttaagaagagcatgagcatcattcagcggaaaccaactccaatcacacttaat
gcggtcccatgcattctgggtgtaaatctatcagatgttgatctactagagtttcttcag
cagcttgctgatactgacggatcatcaacaattcctccatctgttcttcgaatcctgaac
tccaaagcatgtagaggtgcaattatgttcggagattctctgttaccctcggaatgctct
ttaatcatcgaaggattaaagcagacctcactgtgtttccagtgtgctcatgggcgacca
acgacagttcctctagtcgatttgaaggcattacacaaacagataacaaagctcgaacca
agacaaccgtggcatgggttcgaacgcagagaaatcacacttgatcgtgccaagtcacgc
gtagatgaagctaaaagctaa
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