Brassica napus (rape): 111215538
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Entry
111215538 CDS
T04128
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 3
KO
K05391
cyclic nucleotide gated channel, plant
Organism
bna
Brassica napus (rape)
Pathway
bna04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111215538
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bna04040
]
111215538
Ion channels [BR:
bna04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111215538
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
111215538
NCBI-ProteinID:
XP_048635431
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Position
A5:complement(950722..954318)
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AA seq
704 aa
AA seq
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MEMMNLKRNTFVKFTENEDSWNRPSVTSVIKKTVRRSFEKGSEKIRTFKQQPLTFHSQKK
NENKKKIIRVMNPNDSYLQNWNKIFLLLCVVALAFDPLFFFIPVVDPDRFCLKLDKKLEA
VACVFRTFIDTFYLVHMLFQFNTGFIAPSSRGFGRGELVQSSKKIAVRYLKSYFIIDVLS
ILPIPQVVVLAVVPSMSRPASLVTKELLKWAIFCQYVPRIARIYPLFKEVTRTSGLVTET
AWAGAALNLFLYMLASHVFGSFWYLISIERKDRCWRETCAKIEGCVHGNLYCSGGEDNSQ
YLIGSCPLMDPEEIKNSTVFNFGIFAEALQSGVVESMNFPKKFFYCFWWGLRNLSAVGQN
LKTSDFEGEIIFAIIICISGLVLFALLIGNMQKYLQSTTVRIEEMRVKRRDAEQWMSHRM
LPDDLRKRVREYEQYKWQETRGVEEEALLSSLPKDLRKEIKRHLCLNLLKKVPWFKAMDD
RLLDALCARLNTVLYTENSYIVREGEPVEDMVFIMRGKLISTTTYGGQTGFFNIAHLEAG
DFCGDLLTWALDPNTSHLPISTRTVQAETEVEGFVLSAEDLKFFSTQYRRLHSKQLRHTY
RCYSVQWQTWAACFIQAAWKRYCRRKLSRALREEEERLQNTLQTTDDSGGNKLNLSAAIY
ASRFASHALRNVRANAAARSSMLPHMLSLLPQKPADPEFPMDET
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggagatgatgaatctcaaaagaaacacgtttgtaaagtttactgaaaatgaagattct
tggaacagaccttcagtaacttctgttattaaaaaaacagttagacgtagctttgagaaa
ggctcagagaagatcagaacctttaagcagcagccattaacgtttcattctcaaaagaag
aatgagaacaagaaaaagataatacgagtgatgaatcctaacgactcttatcttcaaaac
tggaacaagattttcttgctcctttgtgttgtagcgttagcatttgatcctctttttttc
ttcatccccgtggtggatccagacagattctgtcttaaactagacaagaaactcgaggca
gtggcttgtgttttccgcactttcatcgacactttctatttggttcacatgttgtttcag
tttaatactggcttcattgctccttcttctcgtggttttggaagaggagagcttgttcag
agttctaaaaaaatcgctgtgagatacctcaagtcatactttataatcgatgttctttct
attctccctattcctcaggtagttgttctagctgttgttccatcgatgagtcgacctgcg
tcactggtaacaaaagagctattgaaatgggcaatattttgtcagtatgttccgaggatt
gcacgaatctatccgctttttaaagaagtaacaagaacgtccggtttggtaactgagact
gcatgggctggagctgctttaaacctattcctctacatgttagctagccatgtctttgga
tctttctggtacttgatatcgattgaaaggaaagatagatgttggcgtgaaacatgtgct
aaaatagaaggatgtgttcatgggaacttatactgttcgggtggggaagacaatagccag
tatctaataggttcttgcccgttgatggacccagaggagataaaaaactcgacggttttc
aactttggtatattcgctgaagcattgcagtctggagttgtggagtcaatgaacttccct
aaaaagtttttctattgtttctggtggggtcttcgcaatcttagtgctgtggggcaaaac
ttgaagacaagtgactttgaaggagagatcattttcgcgatcatcatttgtatctctgga
ctagttttgtttgctcttctcataggaaacatgcagaaatatttgcaatcaactacggta
agaattgaggaaatgagggtgaaaaggagagatgcagagcaatggatgtctcaccgtatg
ttgccagatgatctgagaaaacgtgtacgtgaatacgaacagtataaatggcaagaaacc
aggggagttgaggaagaagctcttctctctagccttccgaaagatctcagaaaggaaatt
aaacgccatctttgtttgaatctcctcaaaaaggtgccgtggtttaaagccatggatgat
cggctactagacgcactttgtgcacgtttgaatacagttctttacacggagaacagttac
attgtgcgtgaaggtgaaccggttgaggatatggtgtttataatgagaggaaaacttata
agtacaactacttatggtggccaaaccggattcttcaatattgctcatttggaagctggt
gatttctgtggagatcttctcacttgggcactggatcctaacacctctcacttacctatc
tctactagaaccgttcaagctgagacagaagtcgaaggctttgtcctctcagctgaagat
ctcaaattcttctctacacagtaccgtcgcctccatagcaagcagctacgacacacgtac
aggtgttattcagtgcagtggcagacatgggcagcatgttttatacaagcagcatggaag
agatactgtagaaggaagctctcaagggctttacgtgaagaagaagaaagactacaaaac
actcttcagaccaccgatgattcaggaggcaacaaacttaacttaagtgctgcgatttat
gcgtctaggtttgcttctcatgctctgaggaatgtaagggctaatgcagcagcacgcagc
tctatgcttcctcatatgctatctttgttgcctcagaaaccagctgatcctgagtttcct
atggatgaaacctaa
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