Brassica napus (rape): 111215693
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Entry
111215693 CDS
T04128
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
bna
Brassica napus (rape)
Pathway
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111215693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
111215693
Spliceosome [BR:
bna03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
111215693
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
111215693
NCBI-ProteinID:
XP_022575371
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Position
A1:19686908..19689493
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AA seq
486 aa
AA seq
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MATLEDSFLADLDDLSDNEAELDESDGDDAKKDEEDIDMDMADLETLNYDDLDSVSKLQK
SQRYLDIMQKVEEALGKESDGTEKGTVLEDDPEYKLIVDCNQLSVDIENEIAIVHNFIRD
KYRLKFQELESLVNHPIDYARVVKKIGNETDLTLVDLEGLLPSAIIMVVSVTALTTKGSP
LPEDVLHKTLEACDRALDLDSARKKVLDFVESKMGSIAPNLSAIVGSAVAAKLMGTAGGL
SALAKMPACNVQVLGHKRKNLAGFSSATSQLRVGYLEQTEIFQSTPPALKSRAGRILAAK
STLAARVDATRGDPSGTNGKALREEIRKKIEKWQEPPPARQPKPLPVPDSEPKKRRGGRR
LRKMKERYAVTDMRKLANRMAFGTPEESSLGDGLGEGYGMLGQAGSNRLRISSVPSKLKI
NPTIAKKLKERNYAGGATTSGLTSSLAFTPVQGIELCNPQQALGLGSGTQSTYFSESGTF
SKLKKI
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgaagattctttcctcgcagaccttgacgacttatctgacaatgaagca
gaactggatgagtctgatggtgatgatgcgaaaaaggatgaagaagatatcgacatggac
atggctgacttagaaaccctcaactacgatgatctcgattccgtttccaagctccagaaa
tctcagagatatcttgacattatgcagaaagtggaagaggctcttggaaaggaatctgat
ggaacggagaaaggaactgtgctagaagacgatcctgaatacaagctaatcgtggattgc
aaccagctctcggttgacattgagaacgagattgccatcgtccacaacttcatccgtgac
aagtacagactcaagtttcaagagcttgaatctctggtaaaccaccctattgactacgcc
cgcgttgtcaaaaagataggcaatgagactgatttaacgctcgttgatcttgaaggcctt
cttccatctgctattatcatggttgtttcagtcactgccttgaccaccaaagggagccca
ctcccggaggatgtcctgcacaagactctagaggcttgtgatcgagctttagatcttgat
tccgcaaggaagaaggttcttgactttgtcgaaagcaagatggggtctattgcaccgaat
ctttctgctattgtcgggagcgctgttgcagccaagctcatgggaaccgctggaggtttg
tcggcgcttgcgaaaatgcctgcctgtaatgttcaagttcttggccacaagaggaagaac
cttgccgggttctctagtgcaacgtcgcagttacgtgtggggtatctggagcagacggag
attttccagagcacgcctcccgcgcttaagagtcgcgctggcaggatcttggctgcaaaa
tctactttggcggcgagagttgatgctactagaggagacccgtcgggaacgaatgggaaa
gctttgagggaagagatccgtaagaagattgagaagtggcaagaacctcctcccgcaagg
cagcctaaaccgcttcccgttcctgattccgagcctaaaaaaagaagaggtggtcgccgt
ctaaggaaaatgaaagaaaggtatgcagtgacagacatgaggaagcttgccaacaggatg
gcctttggtacacccgaagagagctctcttggtgatgggttaggtgaaggatatgggatg
cttggccaggctgggagcaacaggctgcgtatatccagtgttcccagcaagctcaagatt
aatcctaccatcgccaaaaagctgaaagaaagaaactatgcaggtggtgccactacctct
ggattgacatcgagtctggcttttactcctgtgcagggaatagagctgtgcaatcctcaa
caggctttagggttaggcagtgggactcaaagcacttacttttcagagtcagggaccttc
tctaagctcaagaagatataa
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