Brassica napus (rape): 111215720
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Entry
111215720 CDS
T04128
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
bna
Brassica napus (rape)
Pathway
bna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111215720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
111215720
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111215720
mRNA degradation factors
5'-3' decay
Lsm complex
111215720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
111215720
NCBI-ProteinID:
XP_022575451
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Position
A5:complement(24186662..24188329)
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AA seq
128 aa
AA seq
DB search
MSWAGPEDIYLSTSLASYLDRKILVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQ
YCDIPLGLYVIRGENVVLIGDLDTEREELPPNMIRVSETEIKRAQKVEREASELRGTMRK
RMEFLDFD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgggctggtcctgaagatatttacctttcaacttcactcgctagttatctcgac
agaaagattcttgtgctccttagggatggtagaaagctaatgggaaccctccgttcattt
gatcaatttgccaatgcggttctagaaggtgcttgcgagagggtgattgttggtgagcaa
tactgcgacattcctctaggcctctatgtaatccgtggagagaatgttgttctcattggt
gacctggacactgagagagaggagcttcctccaaatatgattcgtgtctcagagacagag
attaaaagggcgcaaaaagtggagagggaagcgagtgagctgagaggaacaatgaggaag
agaatggagtttcttgacttcgattaa
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