Brassica napus (rape): 111216227
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Entry
111216227 CDS
T04128
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
111216227
03036 Chromosome and associated proteins [BR:
bna03036
]
111216227
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111216227
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
Helicases
111216227
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
111216227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
Motif
Other DBs
NCBI-GeneID:
111216227
NCBI-ProteinID:
XP_048603311
LinkDB
All DBs
Position
C2:complement(57934513..57938508)
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AA seq
663 aa
AA seq
DB search
MPSLALSEEKKMKKSTSSETTTPAATTPDSKKKKEKKPKKLSDSDGEEDSEKKKSKKKKR
KAAAESSDSGSELVEPESSKKKVKLSVVEDVKVVENPNAVSKFRISDPLREKLKEKGIEA
LFPIQATTFDMVLDGADLVGRARTGQGKTLAFVLPILESLINGPAKNKRKNGYGRPPSVL
VLLPTRELAKQVFADFDAYGGSVGLTSCCVYGGDPYPPQQQKLKKGVDIVVGTPGRIKDH
IERQNLDLTYLQFRVLDEADEMLRMGFVDDVELILGKVEDPKKVQTLLFSATLPSWVQNI
ASRFLKQDKKTIDLVGNDKMKASNSVRHIALPCSKQAMSRLIPDIISLYSSGGSTIIFTE
TKDQASELSGLLPGARALHGDIQQSQREITLAGFRKGKFSTLVATNVAARGLDINDVQLI
IQCEPPRDVEDYIHRSGRTGRAGNTGVAVMLYDSRKSGVSRIEKQAGIKFEHVSAPQPND
IAKAIGMEAAEKITQVCDTVVPAFLAAAKELLESSGVSAEVLLAKALAKTAGFTEIKKRS
LLTSMENHVTLHLEAGRPIYSATNAFSVLRRVLPDDKVNLIEGMTLTVDGGAVFDVVQSD
VDQFIAAGQKNAGSMSLEVVKEMPKLQEREPVQRRYGGGGGRFGRGGGGGGRFGRGGGRG
QRW
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgccttcactagctttatccgaggagaagaagatgaagaagagcacatcctcagagaca
accacccccgccgccaccacaccagactccaagaagaagaaagagaagaagccgaagaaa
ctctcagactccgacggagaagaagactccgagaagaagaagagcaagaagaagaagcgc
aaggccgctgcggagagtagcgattcagggtccgagctggtggagccggagagctcgaag
aagaaggtgaagctgagcgttgttgaagatgttaaagtcgtcgagaaccctaacgctgtt
tcgaagtttagaatctcggatccgttgagggagaagcttaaggagaagggtatcgaggct
cttttcccgattcaggcgaccacttttgatatggttcttgatggggctgatcttgtcgga
agggctcgtactggtcagggtaaaacattggctttcgtgttacctatattggagtctttg
atcaatggacctgccaagaacaaaaggaagaatggatacggcaggccacctagtgttttg
gtacttttaccaaccagagaattggccaagcaggtgtttgctgactttgatgcgtacgga
ggatctgttggtttaacttcttgctgtgtctatggaggtgatccttaccctcctcagcag
caaaaactaaagaaaggtgttgacattgtagttggtacccctggtcgtatcaaggatcat
atcgaaaggcaaaaccttgacctgacctacctacagttccgtgttcttgatgaagctgat
gaaatgctgagaatgggattcgtcgacgacgttgaactcatcttagggaaggtggaggat
cctaaaaaggtccagacgcttctcttcagtgctaccttgccatcatgggttcaaaacatt
gcgtctaggtttcttaaacaagacaagaagactattgatcttgttggtaatgataaaatg
aaggccagtaacagtgtcagacacattgctcttccctgcagtaagcaagccatgtctcgc
ttgattcctgacatcatcagcttatacagcagtggaggtagtaccatcattttcactgag
actaaagaccaagcttctgagctttctggtctgttgcctggtgctagagctttgcatggt
gacattcaacaatcacaacgtgagattactcttgctggatttagaaaaggaaagttctcg
acattggttgctacaaacgttgctgctcgtggtctagacatcaacgacgtgcagctaatt
attcagtgtgagcctccacgtgatgttgaagactacatccatcgttcagggcgaacggga
agagctggcaacactggagttgcggtcatgttatacgattctagaaagtctggcgtgtcc
aggattgagaaacaagctgggataaagtttgagcacgtgtctgcgccccagcctaatgat
atcgccaaagccattggtatggaagctgctgagaagatcacacaagtctgtgacactgtg
gttcctgcgtttctggcggcggccaaggagctgttggagagctccggtgtgtcagctgaa
gtactccttgctaaagctcttgccaaaaccgcgggctttactgagattaagaaaaggtct
cttctaacatcaatggagaaccatgtcacgttacatcttgaagcagggagacctatatac
tcggcaactaatgcatttagtgtgctgaggagagttttaccggatgacaaggttaatttg
attgaagggatgactctaacagtagacggaggtgcggttttcgatgttgtgcagtcagat
gtagaccagtttattgcggctggacaaaagaatgctgggagtatgagcttggaggttgtt
aaagagatgcctaagcttcaagagcgtgaaccagtgcagagaagatatggtggtggtggg
ggtaggtttggtcgtggaggaggtggtggtggaagatttggtcgtggtggtggcagaggc
cagagatggtga
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