Brassica napus (rape): 111216246
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Entry
111216246 CDS
T04128
Name
(RefSeq) bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase-like
KO
K12451
3,5-epimerase/4-reductase [EC:5.1.3.- 1.1.1.-]
Organism
bna
Brassica napus (rape)
Pathway
bna00541
Biosynthesis of various nucleotide sugars
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
bna01250
Biosynthesis of nucleotide sugars
Module
bna_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
111216246
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
111216246
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GFIT
Motif
Pfam:
RmlD_sub_bind
Epimerase
GDP_Man_Dehyd
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
DUF7381
Motif
Other DBs
NCBI-GeneID:
111216246
NCBI-ProteinID:
XP_022576404
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All DBs
Position
C5:complement(5643736..5645047)
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AA seq
323 aa
AA seq
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MRDPNSLFLFFAGEIFNQFTTERMGAEANGSSSSLNFLIYGRTGWIGGILGKLCAAQGIP
YTYGSGRLEDRRSLVADLDSVKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLA
DVCKERGLVLINYATGCIFEYDSGHPLGSGLGFKEEDTPNFTGSFYSKTKAMVEELLKNY
ENVCTLRVRMPISSDLSNPRNFITKITRYEKVVDIPNSMTILDELLPISLEMAKRNLTGI
WNFTNPGVVSHNEILEMYREFVDPSFTWKNFTLEEQAKVIVAPRSNNELDATKLKTEFPE
MLSIKESLVKFVFEPNKKTEIKG
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgagagatcccaacagtctcttcttattcttcgccggcgaaatcttcaatcaattcacg
acggagagaatgggagcggaagcaaacggctcatcgtcatctctcaacttcctaatctac
ggccgtacaggctggatcggcggtattctcggcaagctctgcgcagctcagggaatccct
tacacttacggctcaggccgtctcgaggatcgccgttccctcgtcgccgatcttgattcc
gtcaagccgagccatgtgttcaacgccgcgggagtcaccggacgaccgaacgtagactgg
tgcgagtcccacaaggtggagaccatccgtacgaacgtcgtcggaactctgactctagcc
gacgtttgcaaggagagaggcctcgtgctgatcaactacgccacgggttgtatattcgag
tacgactcgggtcatcctctcgggtcgggtctcgggtttaaggaagaggacacccctaac
ttcaccggttcattctactccaagacaaaggctatggttgaggaactgctcaagaactat
gagaacgtatgcacgctccgtgtaaggatgcctatctcgtcggatctctcaaacccgaga
aacttcatcaccaagataactcggtatgagaaagttgtggacatcccaaactcgatgacg
attctcgatgagcttctccctatctcactcgagatggcaaagaggaacctaacggggata
tggaactttactaatccgggggtggtgagccacaatgagatactagagatgtacagagag
tttgttgatccgagtttcacttggaagaacttcacgttggaagaacaggcgaaagtgatt
gtagctccgaggagtaataatgagcttgatgccactaagttgaaaacagagtttccggag
atgttgtctataaaggaatctcttgtcaagtttgtgttcgaaccaaacaagaagacagag
atcaaaggttga
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