Brassica napus (rape): 11542055
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Entry
11542055 CDS
T04128
Symbol
rpoA, BRNAC_p054
Name
(RefSeq) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bna
Brassica napus (rape)
Pathway
bna03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
11542055 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
11542055 (rpoA)
03400 DNA repair and recombination proteins [BR:
bna03400
]
11542055 (rpoA)
Enzymes [BR:
bna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
11542055 (rpoA)
Transcription machinery [BR:
bna03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
11542055 (rpoA)
DNA repair and recombination proteins [BR:
bna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
11542055 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-GeneID:
11542055
NCBI-ProteinID:
YP_005089984
UniProt:
D1L8S0
LinkDB
All DBs
Position
Pltd:complement(76728..77711)
Genome browser
AA seq
327 aa
AA seq
DB search
MVREKVKVSTRTLQWKCVESRRDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
CITRAKSENIPHDYSNIVGIQESVHEILMNLNEIVLKSNLYGTRNALICVQGPGYITARD
IVLPPSVEIVDNTQHIATLTEPINLCIGLKIERNRGYSLKMSNNFEDRSYPIDAVFMPVQ
NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLINLFIPFLHVEEETFYLE
NNQHQVTLPLFPFHNRLVNLRKKKKELAFQYIFIDQLELPPRIYNCLKKSNIHTLLDLLN
NSQEDLIKMEHFHIEDVKKILDILEKK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagagaaagtcaaagtatctactcggacactacagtggaagtgtgttgaatca
agaagagacagtaagcgtctttattatggacgctttattctgtctccacttatgaaaggt
caagccgacacaataggcattgcgatgcgaagagctttacttggcgaaatagaaggaaca
tgtattacacgtgcaaaatctgagaacataccacatgactattctaacatagtcggtatt
caagaatcagtacatgaaattttaatgaatttgaacgagattgtattaaaaagtaatcta
tatggaacgcgcaacgcgcttatttgtgtccaaggtcccggatatataactgctcgagac
atagttttaccgccctctgtggaaatcgttgataatacacagcatatagctaccttaacg
gaaccaataaatttgtgtattggattaaaaatcgagaggaatcgcggatatagtttaaaa
atgtcaaataactttgaagaccgaagttatcctatagatgctgtattcatgcctgttcaa
aatgcgaatcatagtattcattcttatgggaatgggaatgaaaaacaagagattcttttt
ctagaaatatggacaaatggaagtttaactcctaaagaagcacttcatgaagcctcccgg
aatttgattaatttatttattccttttctacatgtagaagaagaaacgttctatttagag
aacaatcaacatcaagttactttacccctttttccttttcataatagattagttaaccta
agaaaaaaaaaaaaagaactagcgtttcaatatatttttattgaccaattagaattgcct
cccagaatctataattgtctcaaaaagtccaatatacatacattattggatcttttgaat
aacagtcaagaagaccttatcaaaatggaacattttcacatagaagatgtaaaaaagata
ttagacattttagaaaaaaaataa
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