Brassica napus (rape): 11542066 Help Entry 11542066          CDS       T04128                                  Symbol rpoC2, BRNAC_p011 Name (RefSeq) RNA polymerase beta'' subunit   KO K03046   DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Organism bna  Brassica napus (rape) Pathway bna03020   RNA polymerase Brite KEGG Orthology (KO) [BR:bna00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     11542066 (rpoC2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:bna03021]     11542066 (rpoC2)    03400 DNA repair and recombination proteins [BR:bna03400]     11542066 (rpoC2) Enzymes [BR:bna01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      11542066 (rpoC2) Transcription machinery [BR:bna03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      11542066 (rpoC2) DNA repair and recombination proteins [BR:bna03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       11542066 (rpoC2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb1_5 RNA_pol_Rpb1_4 RNA_pol_Rpb1_3 Peptidase_M23 Motif Other DBs NCBI-GeneID:  11542066 NCBI-ProteinID:  YP_005089942 UniProt:  D1L8M8 LinkDB All DBs Position Pltd:complement(15576..19712) Genome browser AA seq 1378 aa AA seqDB search MAERANLVFHNKVIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGID DLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFR MTDPFNPVHMMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYII SCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTIRGISVSPRNKSRMMSER IFIQTLIGRVLADDIYIGSRCVAFRNQDLGIGLVNRFITFGTQSISIRTPFTCRSTSWIC RLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPYNG KIKFNEDLVHPTRTRHGHPAFLCYIDLSVIIESEDIIHSVTIPPKSFLLVQNDQYVESEQ VIAEIREGTSTFHFKERVRKYIYSDSEGEMHWSTDVSHAPEFTYSNVHLLPKTSHLWILS GGSCGSSLILFSIHKDQDQMNIPFLSVERKSISSLSVNNDQVSKKFFSSDFSDKKKSGIP NYSELNGIVGTSHYNFIYSAIFHENSDLLAKRRRNRFLIPFQSIQEQAKEFIPHSGISIE IPINGIFRRNSIFAFFDDPRYRRKSSGILKYGTLKADSIVQKEDMIEYRGVQKFKTKYEM KVDRFFFIPEEVHILPESSAIMVQNYSIIGVDTRITLNIRSQVGGLIRVERKKKRIELKI FSGDIHFPDKTDKISRHSGILIPPGRGKTNSKESKNLKNWIYAQRITPTKKKFFVLVRPV ATYEIMDSINLATLFPQDLFREKDNIQLRVFNYILYGNGKPTRGISDTSIQLVRTCLVLN WDQDNKNSSLEEVRAFVVEVSTKGLIRDFIRIGLVKSHISYIRKRNNPPDSGLISADSVN PFYSLSPKAGILQQSLRQNHGTIRMFRNKESQSLLILSSSNCFRIGPFNHVKYHNVINQS IKKKPLITIQNSSGPLGTAIQISNFYSFLPLLTYNQISVIKYLQLDNFKYIFQIIHSYLI DENGRIFNLDPYSNLVLNPFKLNWYFLHQNYNNYYCEETSTIISLGQFFCENLCIAKKEP YLKSGQVLIVQRDSVVIRSAKPYLATPGAKVHGHYREILYEGDTLVTFIYEKSRSGDITQ GLPKVEQVLEVRSIDSISLNLEKRIKGWNRCITRILGIPWGFLIGAELTIVQSRISLVNK IQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEEGMSNVFLPGELIGLLRAERTGRALEEA ICYRAVLLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGVIPA GTGFNKGLVHCSRQHTNILFEKKTKNLSLLEGDMRDILFYHREFCDSSIYKSAFSRIE NT seq 4137 nt NT seq  +upstreamnt  +downstreamnt atggcggaacgggccaatctggtatttcacaataaagtgatagatggaactgctattaaa cgacttattagccgattaatagatcacttcgggatggcatatacatcacacatcctagat caagtaaagactctgggtttccagcaagcaactgctacatccatttcattaggaattgat gatcttttaacgataccttctaagggctggcttgtccaagatgctgaacaacaaagtttg attttggaaaaacaccatcattatgggaatgtacatgcggtagaaaaattacgccaatct attgagatatggtatgctacaagtgaatatttgcgacaggaaatgaatcctaattttagg atgacggaccctttcaatccagtccatatgatgtctttttcgggagctagaggaaatgca tctcaagtacatcaattagtaggtatgagaggattaatgtcggatccccaaggacaaatg attgatttacctattcaaagcaatttacgcgaaggactgtctttaacagaatatattatt tcttgctatggagcccgtaaaggagttgtagatactgcggtccgcacatcagatgctgga tatcttacgcgtcgacttgttgaagtagttcaacatattgttgtacgtcgaacggattgt ggcactatccgagggatttctgtgagtcctcgaaataaaagtcggatgatgtcagaaaga atttttatccaaacattaattggtcgtgtcttagcagacgatatatatataggttcccga tgtgtcgcctttcgaaatcaagatcttgggattggacttgtcaatcgattcataaccttt ggaacacaatcaatatctattcgaactccctttacttgtcggagtacatcttggatctgt cgattatgttatggccggagtcccactcatggtgacctagttgaattgggggaagctgta ggtattattgcgggtcaatctattggcgaaccggggactcaactaacattaagaactttt cataccggtggagtatttacaggaggtactgccgaacatgtacgagccccttataatgga aaaatcaaatttaatgaggatttggttcatcctacacgtacacgtcacgggcatcctgcc tttctatgttatatagacttgtctgtaattattgagagcgaagatattatacatagcgtg actattccaccaaaaagttttcttttagttcaaaatgatcaatatgtggaatcagaacaa gtgattgctgagattcgcgagggaacatccacttttcattttaaagagagggttagaaaa tatatttattctgactccgagggcgaaatgcattggagtactgatgtatcccatgcaccc gaatttacatatagtaatgtccatcttttaccaaaaacaagtcatttatggatattatca ggaggttcttgtggatctagtctaattcttttttcgatccacaaagatcaagatcaaatg aacataccctttctttccgtcgaaagaaaatctatttctagcctctcagtgaataatgat caagtgagcaaaaaatttttcagttcagatttttctgataaaaaaaaatctgggattccc aattattcagaattgaatggaatcgtaggtactagtcattataatttcatatattctgct atttttcatgagaattcggatttattagcaaaaaggcgaagaaatagatttctcattcca ttccaatcgattcaagagcaagcgaaagagttcataccacattcaggtatctcgattgaa atacccataaatggtattttccgtagaaacagtatttttgctttttttgatgatcctaga tacagaagaaagagttccggaattcttaaatatggaactctaaaggcggactcaatcgtc caaaaagaggatatgattgagtatcgaggagtccaaaaatttaagacaaaatacgaaatg aaagtagatcgcttttttttcattcctgaggaagtgcatattttacccgaatcctccgcc ataatggtacagaactatagtatcattggagtcgatacacgaatcactttaaatataaga agccaagtcggcgggttgatccgagtggagagaaaaaaaaaaaggattgaactcaaaata ttttcgggggatatccattttccggacaagacagataagatatcccgacatagtggcatc ttgataccgccaggaaggggaaaaacaaactctaaagaatcaaaaaatttaaaaaattgg atttatgcccaacggatcacaccaaccaagaaaaagttttttgttttggtgcggcccgta gctacctatgagataatggacagtataaatttagcaacactcttcccacaagatctcttt cgggaaaaggataatattcaacttcgagttttcaactatatcctttatggaaatggtaaa ccaactcgaggaatttctgacacaagtattcaattggttcgcacttgtttagtcttgaat tgggaccaagacaacaaaaattcttccctcgaggaggtccgcgctttcgttgttgaagta agtacaaagggtttgattcgagatttcataagaattggcttagtgaaatcccatatttcg tatataagaaaaagaaataatccgccggattcgggattgatctctgcagattccgtgaat ccgttttattcgctttctcccaaggctggcattcttcaacaatcgcttagacaaaatcat ggaactattcgtatgttcagaaataaggaatcccaatctttgttaattttatcatcctct aattgttttagaatcggtccatttaatcatgtaaaatatcacaatgttataaaccaatca ataaaaaaaaaacctctaattacaattcaaaattcgtcgggccccttaggaacagccatt caaatttcgaatttttattcatttttgcctttactaacttataatcagatctctgtaatt aaatatttgcaacttgataacttcaaatatatttttcaaataattcactcttatttaata gatgaaaacggaagaatttttaatctagatccatacagtaaccttgttttgaatccattc aaattgaattggtattttcttcatcaaaattataataattattattgtgaggaaacgtcc acaataataagtcttggacaatttttttgtgaaaatctatgtatagccaaaaaagaacca tacctaaaatcgggtcaagttttaattgttcaaagggattctgtagtaataagatccgct aagccctatttggctactccgggagcaaaagttcacgggcattatagagaaattctttac gaaggggatacattagttacatttatatatgaaaaatcgagatccggtgatataacccaa ggtcttccaaaagtagaacaggtgttagaagtccgctcgattgattcaatatcactgaac ttagaaaagcggattaagggttggaacaggtgtataacaagaattcttggaattccttgg ggattcttgattggtgctgagctaactatagtgcaaagtcgtatttctttggttaataag attcaaaaggtttatcgatcccagggggtgcagattcataataggcatatcgaaattatt gtacgtcaaataacatcaaaagttttggtttcagaagagggaatgtctaatgttttttta cctggagaattgattggattgttacgagcagaacgcacggggcgtgctttagaagaagca atctgttatcgagccgttttattaggaataactcgagcatctttgaatactcaaagtttt atatccgaagcaagttttcaagaaactgctagagttttagcaaaagctgctcttcggggt cgtatcgattggttgaaaggcctgaaagaaaatgttgttctagggggtgtgatccccgcc gggaccgggttcaacaaaggattggtgcattgttcacggcaacataccaatattcttttt gaaaaaaaaacaaagaatttatctttattagagggagatatgagagatattttattttat cacagggaattttgtgactcttctatttacaaatctgccttttctagaattgaataa

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