Brassica napus (rape): 125574840
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Entry
125574840 CDS
T04128
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13-like isoform X2
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
125574840
Enzymes [BR:
bna01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
125574840
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
125574840
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Maf_flag10_N
RNPP_C
Methyltransf_25
MTS
Motif
Other DBs
NCBI-GeneID:
125574840
NCBI-ProteinID:
XP_013735346
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All DBs
Position
A3:14435630..14437803
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AA seq
436 aa
AA seq
DB search
MAARSGSRCNFWLPKKKRSCANTRIESSLFCGNHSQRSDGQWLPCPIDPSHSVLQENLES
HVKRCPLLKQNVALSGQVFYQKGINAGNQEEEEENIGSCYSVVTSEMKRSLVYGMSVSTF
HQLVKKIEEVHGGICNDIEDSHLSPEACNIWFNKEIDRKLPFQEKHVLQQGSILGNLEKI
GALKRCNTNVECSEKDEDSVPAVVEFGAGRGYLTQMLADCYGVKKVYLVERKSYKLKADR
SLRQKENLVLERMRIDSVPYVAVGKHLCGPATDLSLRCCLSRQDGESPVLRGLAIATCCH
HLCQWKSYINKEYIIGMGISKDEFHALTWFTSWAVDDDHGSKVPGVEGIDLIASKEEEDG
DKVEDDSLSSVEEVVKKMKPMERAFLGFKCKQIIDAGRMKWVKKHELDSKLVKYIPASIS
PENTLLVAGKLSPVLA
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgagaagtggcagtcgatgcaatttctggcttccgaagaagaaaagatcatgc
gccaatactcgaatcgagagctccctgttttgtggaaaccatagccagagatcggatggt
cagtggcttccatgccctattgatccttctcactctgtgttgcaggagaatctcgaaagt
catgtaaagagatgtcctttgttgaaacagaacgttgcattgtctggtcaagtgttttat
caaaagggtattaatgccggaaaccaagaagaagaagaagaaaatataggttcttgttac
tctgttgttacatcagagatgaagaggagtctggtctatggtatgagtgtttccacgttt
catcagcttgttaagaagattgaggaggttcatgggggtatatgtaatgatatagaagat
tcgcatttgtcacctgaagcttgtaacatatggtttaacaaggagatagataggaagtta
ccgtttcaagagaaacatgttttgcaacaaggttctattctgggtaatttggaaaagatt
ggtgcattgaagaggtgtaacacaaatgttgaatgttccgagaaagatgaagatagtgtg
cctgcggttgttgaatttggagctgggagaggatacttaacgcagatgctagctgattgc
tacggcgtcaagaaagtgtatttagttgagaggaagtcttataagcttaaggctgatagg
tcactgaggcaaaaggagaacttggtattagagcgtatgagaatcgacagtgttccttat
gtggctgttgggaaacatctatgtggtcctgcaacagatttgagcttaagatgttgtcta
tctagacaagatggtgaaagcccagttctaagaggtctcgctattgcgacttgttgccat
catctttgccaatggaaaagctatataaataaagaatatatcattggcatggggatttct
aaagacgagttccatgccttgacttggttcactagctgggcagtagatgatgatcatggt
tccaaagttcccggtgttgaaggcattgaccttattgcttcaaaggaggaggaagacgga
gacaaggtggaagatgattctttgagcagcgttgaggaagttgtgaagaagatgaagccc
atggaaagggcttttttagggtttaagtgcaagcagattattgatgcagggaggatgaag
tgggttaagaagcatgagttagattcaaagcttgtgaaatatattccggcaagcatctca
ccggagaacactttactggtcgccggaaagctaagtccggttcttgcttga
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