Brassica napus (rape): 125574872
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Entry
125574872 CDS
T04128
Name
(RefSeq) F-box protein SKP2B-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
bna
Brassica napus (rape)
Pathway
bna04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125574872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
125574872
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125574872
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GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
F-box-like
LRR_NXF1-5
F-box
LRR_EndoS
Sulfolobus_pRN
Motif
Other DBs
NCBI-GeneID:
125574872
NCBI-ProteinID:
XP_048617469
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Position
C6:46519763..46522129
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AA seq
355 aa
AA seq
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MMSEGGSLNLCFEKMEGNMITEWKDIPVELLMRILNLVDDRTVIIASGVCSGWRDAISFG
LTRLSLSWCKKDMNSLVLSLAPKLVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLS
KSLKLTDHSLYSLARGCTNLTKLNLSGCTSFSDTALAYLTRICRKLKVLNLCGCVEAVSD
SALQAIGENCSQMQSLNLGWCEKISDDGVMSLAYGCPDLRSLDLCGCVLITDESVVALAN
RCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKHEMWRSVKKGNFDEEGLRNLNISQCTYL
TPSAVQAVCDTFPALHTCSGRHSLVMSGCLNLTSVHCACILQAHRTHTALPHPAH
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgaaggaggatcacttaacctatgcttcgagaagatggaaggaaacatgatc
accgagtggaaagatatccctgtggagcttctcatgaggatccttaaccttgttgatgat
cggacggtcatcattgcttctggtgtttgctctggctggagagatgctatctccttcggt
ctcactcgtctctccctctcatggtgcaagaaagacatgaacagtttggttctgtctctc
gcaccaaaactcgtcaagcttcagactctagtactaagacaagacaaaccgcaactcgaa
gacaacgcagtggaagccatagcgaatcactgtcacgagttacaagatcttgacctaagc
aaaagcttgaaactcactgaccactccctctattctctagctcgcggctgcactaacctc
actaaactcaaccttagcggctgcacttcgttcagcgacactgctctcgcgtatttgaca
aggatttgtaggaagcttaaagttctgaatctttgtggttgtgtggaagctgtatctgac
agtgcattgcaggctattggagagaactgtagtcaaatgcagtcactaaacttgggatgg
tgtgagaagataagtgatgatggtgtcatgagtttagcttatggttgtcctgatcttaga
agccttgatctctgtggctgtgtacttattacagatgagagtgtggtggctttggctaat
cgttgtgtacacttaaggtcattggggctatactattgcagaaacataaccgacagggcc
atgtactcgctggctcagagcggagtgaagaacaaacacgagatgtggagatcggttaag
aaaggcaatttcgacgaagaaggactaagaaaccttaacattagccaatgcacttacctc
acaccttcagctgttcaagcggtttgtgatacgttccctgcgctccacacttgttcaggc
aggcattcacttgtcatgagcggttgtctgaacttaacatcggttcactgtgcttgcatc
cttcaggctcaccgcacacacacagctttacctcacccggctcattga
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