Brassica napus (rape): 125574874
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Entry
125574874 CDS
T04128
Name
(RefSeq) ATP-dependent RNA helicase DEAH13-like
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
125574874
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125574874
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
90S particles
Helicases
125574874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DHX37_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
ATPase
HTH_51
ResIII
DUF7813
Motif
Other DBs
NCBI-GeneID:
125574874
NCBI-ProteinID:
XP_048600730
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All DBs
Position
A2:complement(25348597..25353327)
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AA seq
1237 aa
AA seq
DB search
MKGEDSNLDIMPPRKKKNTGPNKMSDKLNLKKTTLSKSQKRKLKKIEEEKERELLSAKTA
ELLDKYKISEDVSLLLQSSKAIGRSDTKLEKRRRPMQLSKAGVLSDEPVKENDDSDSFMD
DEPTTPENHLPTLQTDSEQLTHANEVMISAEEVHEEDETKVREEDETMFKNLQTTRRDDD
DEEEGLQRMDESEDVTLKGPAFVVHVSRPAEVEETRKELPIIMMEQEIMEAINYHPTVII
SGKTGCGKTTQVPQFLYEAGFGSKQVSSRSGVIGITQPRRVAVLATAKRVAHELGVRLGQ
EVGFQVRYDKKIGENSAIKFMTDGILVREIKDDLLLKRYSVIILDEAHERSLNTDILIGM
LTRSIKMRQELYRDQQKHLQNGGTIASKDVIWPLKLILMSATLRVEDFVSGQRLFPKPPP
VIEVPTRQYPVTIHFSKRTDEFNYMGEAYKKVMSIHKKLPQGGILVFVTGQREVENLCEK
LRKSSKELVAQAARRDASEKEKKLEDDADGSFGGVDMKEIAEAFDDASNTQDYKFNSFGE
DPYETGNGEHDDFDEENMYESDEESDWETINDDGGLASSLEEDGKKVDALRAAFKALADK
KGSESTETTTTSTEAEEEEEKKPFTPGKLRVLPLYAMLSPDAQLRVFAEVEEGERLVVVA
TNVAETSLTIPGIKYVVDTGRAKAKSYDIKTGMDAYEVDWISQASASQRAGRAGRTGPGH
CYRLYSSTVFSNTFEESSPPEITRVPIDGVVLQLKSMNIPKVENFPFPTPPEPSSIKQSE
RCLKALEALDSDGRLTPLGNAMSNYPMSPRHSRMLLTVIQMLKEATNYSRANLVLAYAVA
AAAALSLENPLIMQFGEEKQNEDHEDDKQRKKDRKDKIKAARDRFSNPSSDALTVAYVLH
SYEVAEDGPGLFCETNGLNMKTMNEMSKLKADLLRLVFRSSETENLYKWTHGTIQDVEES
WRNAASSKTPLLQKEEELLGEAICAGWADRVARKTKSTQYQACAVQEEPVYLHRWSSLIN
SAPELLVYSELLRTNKPYMHGATRVKPEWLVKHAKSLCVFSTPLKDPKPYYSRELDRVFC
WVVPSFGPHLWELPAHSEAISDDMYRAAVFGYALLRGEVLPCLKSARALMAGKPETLLER
EGWGLERVGSLLKALNEKKIDSLGSLRKRWEQNPNVLYPEIEAWFQKKCRHHVKELWQRM
LQEAKVNVPGKLKRSSVIPIERSDEKLKRPRAKVCFE
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgaagggagaagattccaatttagatataatgcctccaaggaagaagaagaacacagga
cccaacaagatgagtgataagctcaatttaaagaagacgactttgagcaaatctcagaaa
cgtaagctgaagaaaattgaggaagagaaggagagagagctcctctctgccaaaaccgca
gagttgttagacaagtataaaatatctgaggatgtgtctttgcttttacaatcttcaaaa
gctattggaagatctgatacgaagctggagaaacgtaggagaccaatgcaactatctaaa
gctggtgttttgtctgatgaacctgtcaaggaaaatgacgactctgattcttttatggac
gatgagcctaccacacctgaaaaccatctcccgactcttcaaactgactctgagcaactt
actcatgccaatgaagtgatgatctctgctgaagaggtccatgaagaagatgaaactaag
gtccgtgaagaagatgagactatgtttaagaatctacagacaactcgacgtgatgatgat
gatgaggaggaaggcttacaaagaatggatgagagtgaagatgtaactctaaaaggacct
gcgtttgtagttcatgtttcaagaccagctgaagttgaagagaccaggaaggaacttcct
ataataatgatggagcaggagatcatggaggctattaattatcaccccaccgttattatt
tctggaaagaccggttgtggtaaaaccactcaagttcctcagttcctctatgaagctggt
tttggttcaaagcaagtcagttctcggagcggggttatcggtattacacagccacgtcgt
gtggctgtcctcgccactgccaagagggtggctcatgagcttggtgttcgtctcggtcaa
gaagttgggtttcaagttaggtacgacaaaaagattggcgagaactcagctatcaagttt
atgaccgatgggattctagtccgtgaaattaaggacgatctcttactgaagcgttactcg
gtgatcattctcgatgaagctcatgaaagaagcttgaacacagacattctaattgggatg
ctcactcgctccatcaaaatgcgacaggaactctacagggatcaacagaagcatctacaa
aatggaggcacaatagcatcaaaagacgttatctggccgcttaaacttatattgatgagt
gcaactctgcgagtagaagatttcgtatcggggcaaaggttgttcccgaagccacctccg
gtaatagaggttcccactcgacagtacccggtgactatacatttctccaagaggaccgac
gagtttaattatatgggtgaagcttataagaaagtgatgtcgattcacaaaaagctacca
caaggagggatacttgtgtttgtgacgggacagagagaagttgagaatctgtgcgagaag
ttgcgtaagtcttcaaaggagcttgttgctcaagctgctagaagagatgcgtctgagaag
gagaagaaactggaagatgatgctgatggttcgtttggtggtgttgacatgaaggagatt
gctgaagcatttgatgatgcctccaacactcaagactacaagtttaactcgtttggagaa
gatccttatgaaactggtaatggtgaacatgatgattttgatgaagaaaacatgtatgag
tctgatgaagaaagcgactgggaaacaattaatgacgacggcggccttgcgagttcactt
gaagaagatgggaagaaggttgatgctcttcgtgcagcgtttaaagctttggcggacaaa
aaaggatctgaatctactgagacaacaacaacgtccactgaagcagaggaggaggaggag
aagaaaccatttactccagggaagctacgtgttcttccactatatgcgatgctatctcca
gatgcacagctccgagtgtttgcggaagttgaggaaggagagagacttgtggttgtggca
actaatgtagcggagacttctctgaccattccggggataaagtatgtggttgatactggc
cgtgccaaggccaagagctacgatatcaagactggtatggatgcatatgaggttgattgg
attagtcaagcttcggctagtcaacgagctggaagagctggacgtactggacctggccac
tgttaccgtctctactcatctacggttttcagcaacacatttgaggaatcatcccctcct
gaaatcaccagagttcctatcgatggagtcgttcttcaattgaagtctatgaacattcca
aaggttgagaactttccgtttccgacaccgcccgagccatcgtctattaaacagtcagaa
agatgcttaaaagctttagaggctctggacagcgacgggaggctaacaccgctagggaat
gctatgtctaactatcccatgagtccacgtcactcgagaatgcttctcacagtcatccaa
atgctgaaagaggcaactaactactcccgggcgaatctcgtccttgcgtacgcggttgca
gcagcagctgcgttgagtttagagaaccctttgataatgcagtttggagaagagaaacaa
aacgaggatcatgaagatgataagcaacggaaaaaggatcggaaagataaaatcaaagct
gctcgcgacagattctccaacccgagcagcgacgctttgaccgtagcttacgtgttgcat
tcctatgaggtcgcggaggatggcccgggcctcttctgcgagaccaacggcttgaatatg
aagactatgaacgagatgtctaagctcaaagctgatcttctgcgacttgttttcagatcc
tccgaaactgagaacctttacaaatggactcatgggactatacaagacgtggaggagtca
tggagaaacgcggcatcatcgaaaactccgcttttgcagaaggaagaagagctcttggga
gaagccatatgcgctggatgggcagaccgtgtagccagaaagactaaatccacacagtac
caagcgtgtgcggttcaagaagagcctgtttacttgcaccgctggtcttctctcataaac
tctgcaccagagttactagtctacagcgagctcctacgaaccaacaaaccgtacatgcac
ggagcgacgcgggtgaagccggagtggctggtgaaacacgcaaagtctctgtgtgtgttc
tccacgccgctcaaggacccgaaaccgtattactcgagggagctggacagagttttctgc
tgggtggttcctagcttcggtcctcatctttgggagcttccggctcacagcgaggcaata
agtgatgatatgtacagagcagcagtttttggatatgcgttgcttcgaggagaggtgctg
ccttgtttgaaaagcgctagggcgttgatggctggaaagcctgaaacgctgttggaaaga
gaaggttggggtttagagagagttgggagtttgttgaaagcgttgaatgagaagaagatt
gatagtttggggagtttgagaaagagatgggaacagaatccgaatgtgctgtaccctgag
attgaagcttggtttcagaagaagtgtcgtcatcatgttaaagagctttggcagagaatg
ctgcaggaggctaaggtgaacgttcctgggaagttgaagaggtcgtcagtcatccctatt
gaacgttctgatgaaaagttgaagaggccaagggctaaagtctgttttgaataa
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