Brassica napus (rape): 125574894
Help
Entry
125574894 CDS
T04128
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
125574894
Spliceosome [BR:
bna03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125574894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
FlgA_N
Motif
Other DBs
NCBI-GeneID:
125574894
NCBI-ProteinID:
XP_048614313
LinkDB
All DBs
Position
C5:56330646..56333538
Genome browser
AA seq
387 aa
AA seq
DB search
MSSSQFRYTQTPSKVVHLRNLPWECVEEELIELCKRFGKIVNTKTNVGANRNQAFVEFAE
LNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNQSPGDVPGNVLLVTFEGVESHH
VSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPKYLLPDH
VASCNLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNHTAMDGSMQPALGADGKKVESQSN
VLLALIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIATAAIAKEALE
GHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSLLVGQNVPGVAEASAPTAGW
QNGQVQTQYAGYHAGASPSSGHPPYYG
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagctcacagtttcggtatacgcagacgccgtcgaaggtggtgcacctgcggaat
ctgccgtgggaatgcgtggaagaggagctcatcgaactatgcaaacgattcggcaagatc
gtcaataccaagaccaatgtcggcgccaatcgcaaccaagccttcgtcgaatttgctgag
ttgaatcaggctatatcgatggtttcgtattatgcttcatcttcggagcctgcgcagatt
cgcgggaaaactgtttatatacagtactctaatcgccatgaaattgtgaacaatcagagt
cctggagatgtccctgggaatgtactcttggttacctttgaaggagttgaatctcaccat
gtcagcatcgatgttatccatctggtgttttctgcttttggattcgttcacaaaatcgcc
acttttgagaaagctgcgggtttccaggcactagttcaattcactgatgtggagactgct
tcagcggcaaggagtgcgctagatggcagaagtatacccaaatatctacttccagaccac
gttgcctcttgcaatttgcgaatgtcttattcagctcatactgatctaaacatcaagttt
cagtcccatcgtagcagggattacacaaatccataccttccagtgaatcataccgcaatg
gacgggtctatgcagcctgctttgggtgctgatggaaagaaggtagaaagtcagagcaat
gtcctacttgctttgattgagaatatgcagtatgctgtcaccgtggatgttcttcacacg
gtgttttcagcgtatgggactgtccagaagattgctatatttgagaagaatggttcaaca
caagccttaattcaatactctgatatagcaacggcggcaatagcgaaagaagcattggaa
gggcactgcatatatgacggtggctactgtaagcttcgactatcatactctcgtcatact
gatctcaatgtaaaggcttttagcgacaaaagcagagactacacactacctgatctgagc
ctactcgtgggccaaaatgttcccggagtggctgaagcttcagcgccaacagctggttgg
cagaatgggcaggtgcaaactcaatacgcaggttatcacgcaggggcttcaccttcttct
ggtcatcctccttactatggttga
DBGET
integrated database retrieval system
