Brassica napus (rape): 125574961
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Entry
125574961 CDS
T04128
Name
(RefSeq) transcription initiation factor TFIID subunit 12b-like
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
bna
Brassica napus (rape)
Pathway
bna03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125574961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
125574961
03036 Chromosome and associated proteins [BR:
bna03036
]
125574961
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125574961
Coactivators
SAGA/TFTC/STAGA complex
125574961
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
125574961
STAGA complex
125574961
TFTC complex
125574961
SAGA complex
125574961
SLIK complex
125574961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
DUF5814
Motif
Other DBs
NCBI-GeneID:
125574961
NCBI-ProteinID:
XP_048597609
LinkDB
All DBs
Position
A9:40888426..40891541
Genome browser
AA seq
580 aa
AA seq
DB search
MEPPPASSAPPPSSLQQRQRYVTAPISNSAASPAMVSTTTEGVIQNMASQSPAIGARIPS
PSPLEQQTQSQQLARTQQLPIMQQSPMSNYHIAPSPSVNQIQQQQGQYGGVLRQQGQYVD
VLRQQGQYVDVLGQQGQYGDVLRQQGEMYGTMNFGGSGQSGHLSMLNGGAGAAQMNIHQS
QSLLPSSPRQQSGLVHGSQFHPGSSEQQLHGIGVMESLILRSQMRANPALYPQHRTNLGL
MRSQQHVLTLPQVQNFQRTPSLAFINAQLSGLAQNGQAGMVQNSLTQQQQWLQLISEINS
PNSQSFRLQPSQRQALLLQQQFPSAQLHQNSMPLNQQQISHIIHQQSQMNQAQMNPSQLQ
QMPQPQQQQMPINQQQPSPRMPSHAGQRSVGLTGSQPDATQPGATTPGVVRSSQGPEATN
QLLGKRKLQDLVSQVDAHAKLDPDVEDLLLELADDFLDSVTSFACRLAKHRKSTVLEPKD
VLLHLEKNLQLTVPGFSSQNKHQTKNVPTDLHKKRIAMGQKLRALVESSRPGTNASNSKE
TIRQVMVNPNGANHLLRPSPTSEQLVSQTSGPRMLRHMKH
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggagcctccgcctgcatcctccgcacctccaccgtcgtcattgcaacaacgacaacga
tacgtgacagctccgatttcgaattcagcagcgtctccggcgatggtttcaacgacgacc
gaaggtgtaattcagaacatggcgtctcagagtccagccatcggagctcggatcccgtct
ccttctccgttggaacagcagacacagagtcagcaactcgctcgaactcagcagttgcct
attatgcagcaatcaccaatgtcgaattaccacatagctccatccccttccgttaaccaa
attcagcagcagcaaggtcaatacggcggcgttttgaggcagcaaggtcaatacgttgac
gttttgaggcagcaaggtcaatacgtcgacgttttggggcagcaaggtcaatacggcgac
gttttgaggcagcaaggtgagatgtacgggacgatgaactttggtgggtcaggccaaagc
ggccacttgtcaatgcttaacggtggagctggagcagcccagatgaatattcaccaatcc
caatcattgctaccttcctcgccgaggcaacaatctggtctagtccatggctctcagttt
catccaggaagttctgaacaacagttacatgggattggggtgatggaatcattgattttg
aggtcgcaaatgagagctaaccctgccctctatcctcagcaccgaaccaacctgggacta
atgagatcacagcaacacgttcttactttacctcaggtccagaacttccagagaacacct
tctctcgcattcatcaatgctcagctatctggtttggcccagaatggacaagctggtatg
gttcaaaactcattgacgcagcagcagcaatggctgcagctaatttctgaaataaacagc
cccaattcacaatcattccggcttcaaccgagtcaaaggcaggctctactcttacagcag
cagtttccctctgctcagctgcaccaaaactctatgcctttgaatcagcagcaaatatcg
catattatacatcaacaatcacagatgaaccaggctcagatgaacccatctcaactacaa
cagatgccgcaaccccaacagcagcaaatgccaataaatcaacaacagccatctccaagg
atgccgagtcatgcaggacagagatctgttggtttaacaggctcacaaccagatgcgaca
cagccgggtgcaacaacaccaggtgttgttaggtccagccaaggaccagaagcaacaaac
caactgcttggcaaaagaaaattacaggatctggtttcacaggtggatgcacatgctaaa
ttggatcctgatgttgaagacctccttttggagctagcagatgatttccttgattcggtt
acttcatttgcatgtagattggccaagcatcgtaaatcaaccgtattggagccaaaggat
gtattactccacttagagaaaaacttgcagttgacagttcctggattctcaagtcagaat
aaacaccaaacaaaaaacgtaccaactgatctccacaagaagcgaattgcaatgggtcaa
aagctgcgtgctttggtggaatcgtcacgaccggggacgaatgcaagcaactcgaaggaa
actattagacaagtgatggtgaacccaaatggtgcaaaccatctcttaagaccatctccc
acttcagagcaattggtttcgcagacatcgggtcctcgtatgttacgacatatgaaacat
tga
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