Brassica napus (rape): 125575131
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Entry
125575131 CDS
T04128
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 9-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125575131
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bna01009
]
125575131
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
125575131
03019 Messenger RNA biogenesis [BR:
bna03019
]
125575131
03041 Spliceosome [BR:
bna03041
]
125575131
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
125575131
Protein phosphatases and associated proteins [BR:
bna01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
125575131
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125575131
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
125575131
Spliceosome [BR:
bna03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125575131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
125575131
NCBI-ProteinID:
XP_048632233
LinkDB
All DBs
Position
A3:complement(15606845..15608898)
Genome browser
AA seq
318 aa
AA seq
DB search
MTTTMEAVMEISTVDDIIRRLLEGKGGKQVQLSEIEIRQLCVNARQIFLSQPNLLDLHAP
IRICGDIHGQYQDLLRLFEYGGYPPSAHYLFLGDYVDRGKQSLETICLLLAYKIRYPSKI
FLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDGKILCMHGGLSP
ELENLEQIREIERPTEIPDNGLLCDLLWSDPDQKSEGWSDSDRGISCTFGADVVAEFLDK
NDLDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDQSLVCSFEILKP
APASSGIPLKKVPKMGKS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacaatggaagcagtgatggagataagtacggtggatgatatcataagaaga
ctattagaaggcaaaggaggcaaacaggttcagctctccgagatcgagatccgtcaactt
tgcgttaacgctagacaaatcttcctctctcagcctaatctcctcgacctccatgctccc
attcgcatctgcggtgatattcatggacaataccaagaccttcttcgtctattcgaatac
ggaggctaccctccttcagcacactacctcttcctaggagactacgtcgacagaggcaag
caaagcctcgaaacaatctgcctcctcttggcctacaagatccgttacccgtccaagatc
tttctcctgagaggcaaccatgaagacgccaagatcaacaggatctacggcttctacgac
gaatgcaaacggagattcaacgtgaggctatggaagatattcaccgactgcttcaactgt
ttgcctgtagctgccctcattgacggcaagatcttgtgtatgcacggcgggctgtcgccg
gagctggagaatttggagcagattcgagagattgagaggcctactgagattccggacaat
ggtcttctatgtgatttgctttggtcggatcctgatcagaagagtgaaggatggtctgat
agtgatagaggtatttcttgcacgtttggtgctgatgtggttgctgagttcttggataag
aatgatcttgaccttatttgccgcggtcatcaggtagtggaagatgggtatgagtttttt
gctaaaaggagattagttactatattctctgctccaaactatggtggagagtttgataat
gcaggtgcattgttgagtgtggaccagtctcttgtttgctcttttgagattctgaaacct
gctccagcttcaagcggtattcctctcaagaaggtaccaaaaatgggcaagtcttag
DBGET
integrated database retrieval system
