Brassica napus (rape): 125575187
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Entry
125575187 CDS
T04128
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bna01009
]
125575187
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
125575187
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
125575187
Protein phosphatases and associated proteins [BR:
bna01009
]
HAD phosphatases
Fcp/Scp phosphatases
125575187
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
125575187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
Motif
Other DBs
NCBI-GeneID:
125575187
NCBI-ProteinID:
XP_048607371
LinkDB
All DBs
Position
C3:complement(65089956..65094733)
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AA seq
838 aa
AA seq
DB search
MYSSNRVQVYLEDGRVGEMEICPPRESHQEDHVMKQRRVMEKVKMGIRISRFSQPSERCP
PLAVLATVSSCGLCFKLEASPSPAQEQLSLLYSSCLRGNKTAVMSLGEEELHLVAMYAEN
INNDRPCFWAFTVAPGIYDSCLVMLNLRCLGIVFDLDETLVVANTTRTFEDKIDGLQRRI
NNEGDPQRIAAMVAEMKRYQDDRNLLKQYIESDQVIDNGEVVKVQSELVPALSENHQPLV
RPLIRLPEKNIILTRINPMIRDTSVLVRMRPSWDELRSYLTAKGRKRFEVYVCTMAERDY
ALEMWRLLDPEGNLINASDLLARIVCVKSGFKKSLVNVFPDATCHPKMAMVIDDRLKVWE
DKDQPRVYVVPAFVPYYSPQAEAAATPVLCVTRNVACRVRGGFFRDFDDSLLQRISEISY
ENDVEDIPSPPDVSHYLVPEDETSGLNENKDPLSLDGMAEVERRLKEAISVVLPAANIDP
RIAAPIQYPMASVSAPVPVVQQAPQPSAMAFPSIQFQQPISIAKLLVPSEPSLQSSPARE
EGEVPESELDPDTRRRLLILQHGQDSRDAAPSEPPFPQRPPVQAPPPQAQPRNGWFPVEE
MDPAPLHRTVSKEYPVDSERPRHQSDRMPHENRRLPKELRPNNNLPGSHPFYGEEASWNQ
SSSRISDIGRSVSATENPAEALHEIAIKCGTKVDYRPGLVASTDLRFSVEAWFSGKKVGE
GIGKSRREALQKAAELSLQNLADIYLSVANGDAGPSHRDAIASPLANGNMIMGGNANTFD
NLPFARDETAMAVPSRSMLPLHKRQGSPRSFAGMSNKRLKPDFQRSSMQRMPSSGRYS
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcagtaatagagtccaagtgtatcttgaagatggaagagttggggaaatggag
atttgccctccaagggaatcacatcaagaagaccatgtgatgaagcagaggagagtgatg
gagaaagtgaagatgggaatcagaatcagccgtttttctcaacctagcgagagatgccct
cctcttgcagtgcttgctactgtttcatcttgtggcctttgtttcaaattggaagcttca
ccttctcctgctcaggagcagctcagtctcctctactcgtcctgccttaggggcaacaag
acggcagtaatgtctctaggtgaggaagagctccatttggtagccatgtacgctgaaaac
atcaacaacgaccgtccttgcttctgggcatttacagtagctcctgggatttatgattca
tgtcttgtcatgctgaatctcagatgtctaggtattgtctttgatcttgatgaaaccctt
gtggtggccaataccacgcgcacgtttgaggataagattgacgggttgcagcggagaata
aacaacgagggagacccccaacgcattgccgctatggtggctgagatgaagcgttatcaa
gatgacaggaatctgttgaagcaatatattgaaagtgaccaggttattgataatggggag
gtggttaaagtgcaatcagaacttgttcctgccttgtctgagaaccatcagcctcttgtc
cgtccattgataaggttgccagagaagaatatcatcctgactcgcattaatcccatgatt
cgtgatacaagtgttcttgtgaggatgaggccttcgtgggatgaacttcgaagctatttg
acagcaaaagggcgcaagcgttttgaagtatacgtttgcacaatggctgagagagactac
gccttagagatgtggaggctcctcgatccagaagggaatttgataaacgcaagtgacctg
ctggctcgcattgtttgtgtaaaatctggttttaaaaaatcattggtcaacgtgtttcct
gatgcaacctgccatcctaagatggcaatggtaattgatgatcgactgaaagtttgggaa
gacaaggatcagccaagggtgtacgtggttcctgcatttgttccctactattctcctcaa
gctgaagctgctgctacaccggtactgtgtgttacccgaaatgttgcttgccgtgtcaga
ggtggatttttcagggattttgatgatagtctgctacaaaggatttctgaaatatcttat
gagaatgatgttgaggatattccatctccgcctgatgtcagccattacttagtaccggag
gacgaaacgtctggtttgaatgagaacaaagatccactttccttggacgggatggctgaa
gttgagagaagactgaaggaggcaatttcagttgtccttccggcggcaaatatagatcca
aggatagctgctcccattcagtaccccatggcttctgtttctgctccagtaccagtcgtg
caacaagcaccacaaccatcagcgatggcctttccaagtatccagtttcaacaacctata
tcaatagctaaactcttggttccttcagaaccaagcttgcagagttctcctgctagagag
gaaggcgaggtgcctgaatcagagttagatccagatactaggaggaggctcctcatattg
cagcatggacaagatagtagagatgctgctccaagtgaacctccgtttcctcagagacct
ccagttcaagctccacctccacaggcgcagccaagaaatggttggtttcctgttgaggag
atggatccagctcctcttcatcgtacagtctccaaagaatatccagtggattctgaaagg
ccacgccatcaatctgacaggatgcctcatgagaatcgtaggctaccaaaggagttacgt
ccaaacaacaatctaccaggctcccatcctttctatggggaagaggcatcttggaatcaa
tcttcttctaggatcagtgatattggacgaagtgtctcagcaacagagaatccagctgaa
gctctacatgagattgctattaaatgtggaactaaggtggactacagaccggggttggtt
gctagtacagatttgcggttctctgttgaggcttggttctctggtaaaaaagtcggagaa
gggattggtaaatcgagacgagaagccctgcaaaaggctgctgaactttctctccagaac
ttagctgatatatatttgtctgttgcaaatggcgacgcagggccaagccacagggatgct
attgctagccccttggctaatggcaatatgattatgggaggaaatgcaaatacgtttgat
aatctgccatttgccagagatgaaacagcgatggcagttccttctagatcaatgcttcct
ttgcataagcgacaaggatctccaagatcgttcgctgggatgtcaaacaagcgtctaaag
ccagactttcaacggtcgtcgatgcaacggatgccatcttcaggaagatattcttaa
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