KEGG   Brassica napus (rape): 125575217
Entry
125575217         CDS       T04128                                 
Name
(RefSeq) DNA repair protein UVH3-like isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
bna  Brassica napus (rape)
Pathway
bna03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    125575217
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bna03400]
    125575217
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     125575217
SSDB
Motif
Pfam: XPG_N XPG_I XPG_I_2 UBM
Other DBs
NCBI-GeneID: 125575217
NCBI-ProteinID: XP_048618089
LinkDB
Position
C7:39981529..40001459
AA seq 1460 aa
MGVQGLWELLAPVGRRVSVETLAGKRLAIDASIWMVQFIKAMRDEKGDMVQNAHLIGFFR
RICKLLFLRTKPVFVFDGGTPALKRRTVIARRRQRENAQTKIRKTAEKLLLNRLKEMRVK
EQANDLKKQRLQQSKSAGDKKRVSSESVKVPLRDSADEDGARGSCFREEKIDEISSASMV
GENVTDDAMKVSSKYDPKGKGVLLDEDDLDNRMKCNPEQGSSAGTKDYQEKLDEMLAASL
AAEEDRNFTNKASSSAAEVPSEEEGSEEDEQILLPAMNGNVDPAVLASLPPSMQLDLLVQ
MREKLMSENRQKYQKVKKAPEKFSELQIEAYLKTVAFRREINEVQRSAGGRAVGGVQTSR
IASEANKEFIFSSSFSGDKEVLASAREGRNDGKQNNTPQQSLPVPVKNISSVNKSDATAK
LEKNEPANPDENIEVYIDERGRLRIRNRHMGIQMTRDIQRNLHLMKEKEKTAFGSTSNDD
DETSNAWENFPSEDQFLENLPVNKNDVMNLDNPNDESMLRNQSAIEISFEHDGGGKDLDD
EDDMFLQLAAGGPVTISSAENDPKEDSLSWASDSDWEEVPVGQSSVISKLEVNSSNQHVP
EDISSDEEAAREDSTCENASNSMENDTVTKFSKGYLEEEADLQEAIQKSLLDLHDKESED
VLEENQTVGVNLVDDKPTQDSLCSSETVGKAEAEGTLDGIPILKASGAINEQSNTSVMED
GHIDITKQIGTHPSSSSDNVRRAVGNEMPQVKSGISPEKSFTIASESSMVSTMAKHNNED
GSESFGGEFIKVSPMPIADEERISSHIEILYDTDSQQETREENKLDDRTFNIESSIDLEE
KTVPVELSEAILEEEMRVLDQEYVNLGDEQRKLERNAESVSSEMFAEIQELLQIFGLPYI
IAPMEAEAQCAFMEQSNLIDGIVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIEKEL
GLSRDKIIRMAMLLGSDYTEGISGIGIVNAIEVVTAFPEDDGLQKFREWVESPDPTILGK
TDVKAGSGVKKRGYGSADNESTSGVSADDTEEIKQIFMDKHRKVSKNWHIPATFPSEAVI
SAYLNPQVDRSTEIFSWGKPDLLVLRKLCWEKFGWNGKKTDDLLLPVLKEYEKRETQLRM
EAFYSFSERFAKIRSKRIKKAVKGIGGGLSSEVVDHTLQEGPGIGNKKRLSPDESEDKTS
EKDLSKTDEKATNKRKRSEKPSSSRGRGSAQKRGRGRGRGRKNLLPELSDGSSDGEGDDN
DNVVGLQAPNEAKPGNPQKVRRSTRSRNPVKYSEKEDDQLDESRGNGESLSENLDDDDDD
FLKNLGKLGNVSEERAQNEPTTMDASNNDCPSEDYIQMGGGGFCVDEAETGGDAHVEDKA
SDDYRVMGGGFCVDEDETGEEDDAMDEEVLETEDVNSQNKAKRQNEDPSLEEYGGGIEIG
ISSAGGLSAMPFLKRKKRKN
NT seq 4383 nt   +upstreamnt  +downstreamnt
atgggagtgcaagggctttgggagctactcgctcccgttggtcgccgcgtatccgtcgaa
accctagccgggaaacgattggctatcgatgcgagtatatggatggttcagtttataaag
gcgatgcgtgacgagaagggcgatatggttcagaacgctcacttgatcgggtttttccgg
aggatttgcaaacttttgttcttaaggactaagccggttttcgtctttgacggtggtact
ccggcgttgaaacgccgcactgtcattgcgcgtcgtcgtcagcgtgagaacgctcagacg
aaaattcggaaaaccgctgagaagttgctgcttaatcgactcaaggagatgagggttaag
gaacaagccaatgatcttaagaagcagagactacagcagagtaagagtgctggagataag
aagcgtgtatcttccgaatctgtgaaagttcctttgcgagactctgcagatgaagatggt
gcgcggggcagttgttttcgggaggaaaagatagatgagatatcttcagcatctatggtc
ggagaaaatgttactgatgatgctatgaaagtgtcttcgaagtatgatcccaagggaaag
ggagttttgttggatgaggatgacctggataacagaatgaagtgtaaccctgaacagggt
tcctcagcagggacgaaagattatcaggaaaagttggatgagatgttggcggcatccctt
gcagccgaagaagacaggaattttactaataaagcctcgtcttcagctgccgaagtcccc
tccgaggaagagggtagcgaagaagatgagcaaattcttttgccagcaatgaatgggaat
gtcgacccagctgttttggcttctcttcctccatccatgcaacttgatctccttgttcag
atgagagaaaaattgatgtcagaaaaccggcaaaagtaccaaaaggtcaagaaggcccct
gaaaagttttctgaattgcaaatagaagcatatctcaaaactgtagccttccgtcgagaa
ataaatgaagttcagagaagtgctggtgggagggctgtcggtggagttcaaacttctagg
atagcttctgaagcgaacaaagagtttatcttctcatcttctttttctggcgataaagaa
gtacttgcgtctgccagagaaggaagaaatgatggaaaacagaacaatacgccacaacag
tctttgccggtccctgttaagaatatttcttcggtgaataaatcagatgctactgccaag
ttggagaaaaatgaacccgcgaatcctgatgaaaatattgaagtttatatagatgaaagg
gggcgtctaagaatcaggaacagacacatggggatccaaatgactcgtgatatccagaga
aacttacatttgatgaaagaaaaggagaaaacagcttttggttctacgtcgaacgatgat
gatgaaacgtccaacgcctgggagaattttccttctgaggaccagtttcttgaaaattta
cctgttaataaaaatgatgttatgaatctagataatccgaatgatgaatccatgctgcga
aatcagtctgcaatagagatatcatttgaacatgatggtggtgggaaagatctggatgat
gaagatgatatgtttcttcagttggcagcgggaggaccagtgactattagttctgcagaa
aatgatcccaaagaagactctttgtcgtgggcatctgacagtgattgggaagaagtgcct
gttggacagagtagtgttatctctaagcttgaagtgaattcaagcaatcagcatgttccc
gaggatattagttccgatgaagaggcagcaagggaggacagtacttgtgaaaatgccagt
aactccatggagaacgatacagtaacaaagttctcaaaaggttatttggaagaagaagct
gatttgcaagaggctatccagaaaagtcttcttgacttgcatgataaggaatccgaggat
gtccttgaagaaaatcaaacggtgggggtaaacctagttgatgacaagccaactcaggat
agtctgtgttctagtgaaaccgttggtaaagctgaggcagagggaactctggacgggata
ccaatcttgaaagctagtggtgctataaatgagcagtccaacacttcggtaatggaagat
ggtcacatagatataacaaaacaaattggtactcacccttcttccagttctgacaatgtc
agacgtgcagtgggaaacgaaatgccacaagtaaagtcaggtatctcacccgagaaatca
tttactattgctagtgagagcagcatggtgtccaccatggctaagcacaataatgaagat
ggttctgaaagttttggtggtgaatttatcaaagtgtctcctatgcccatagctgatgag
gagagaatcagttcgcacatagagatactctacgacacagattcacagcaagaaacaagg
gaggaaaataaattggacgaccggacttttaatattgagagttcgatagatttagaagag
aaaaccgtgcctgttgaactttcagaagcaattttggaggaggaaatgcgagttcttgat
caagaatatgtaaatttgggtgatgaacagaggaaacttgagaggaatgctgaatctgtt
agcagtgagatgtttgcggaaatccaggagctactccaaatatttggcttaccatacatc
atagctcccatggaagcagaggcacagtgtgcatttatggaacaatcaaaccttattgat
ggcattgtcactgacgattctgatgtattcttgttcggagcaaggagtgtgtacaaaaat
atatttgatgatcgcaaatatgtggagacatactttatgaaggacattgagaaggagctt
ggcttgagcagagataaaataattcgaatggcaatgctgttaggaagtgattacacagaa
ggaatcagtggaattggtattgtcaatgctattgaagttgtgactgcatttcccgaggat
gatgggcttcaaaaatttcgtgaatgggttgaatcacctgatccaaccattttaggaaag
actgatgtaaaagcaggttccggtgtaaagaagcgcggatatggctccgcagataatgaa
agtacctcaggtgtttcggctgatgacacagaagaaatcaagcaaatcttcatggataag
cataggaaggtaagcaagaactggcacattccagctactttccctagtgaagctgttatt
tctgcctacttaaatccacaagtggaccggtcgactgagattttctcatggggcaagcct
gatctcttagttcttagaaagctatgctgggaaaagtttggttggaacggtaagaagaca
gatgatctgctacttcctgtcttgaaggagtacgaaaaacgcgagacgcaacttcgtatg
gaagctttttattccttcagtgaaagatttgcaaagattcgaagtaaaaggattaaaaag
gccgtcaaaggaattggcggaggtctatcgtcagaagttgttgatcatactctccaggaa
ggtccaggaattggaaacaagaaaagactctctcccgatgaatccgaagataaaacttca
gagaaagatttaagtaaaaccgatgagaaggcgacaaacaaaaggaaacgctctgaaaaa
ccatctagtagtagaggcagaggcagcgcccaaaaaagaggacgcggaagaggaagggga
cgaaaaaacctcctccctgagctatctgacggtagttctgatggtgagggtgatgacaat
gataatgttgttgggttgcaggcacctaatgaagcaaaacctggcaatcctcaaaaagtg
cgaaggtcaacacgatctcggaatcccgtgaagtacagtgagaaagaagatgatcagttg
gacgagtcaagaggcaatggagaatcccttagtgagaatttggacgatgatgatgatgat
ttcctcaaaaacttaggcaaattagggaatgtctctgaagagagagcacagaatgaacca
acaaccatggatgcatcgaataacgattgtccttctgaagactatattcaaatgggaggt
ggtgggttctgcgtagatgaagccgagactggaggagatgctcatgtggaggataaagct
agtgatgattacagagtgatgggtggtggattctgtgttgatgaagatgaaacaggtgag
gaagatgatgcgatggatgaagaggtgttagaaactgaggatgtaaacagccaaaacaaa
gctaaacgtcaaaacgaggatccatcattggaggagtatggtggtggcattgaaattggg
atttcttcagctggaggattaagtgctatgcctttcttgaagagaaagaagaggaagaac
tga

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