Brassica napus (rape): 125575598
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Entry
125575598 CDS
T04128
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like
KO
K03267
peptide chain release factor subunit 3
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125575598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
125575598
03012 Translation factors [BR:
bna03012
]
125575598
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
125575598
Translation factors [BR:
bna03012
]
Eukaryotic type
Release factors
125575598
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
G-alpha
EF-G_D2
Tub
Motif
Other DBs
NCBI-GeneID:
125575598
NCBI-ProteinID:
XP_048597595
LinkDB
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Position
A9:40735409..40740360
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AA seq
528 aa
AA seq
DB search
MDLEADIRALQLDSAEENNGVVIPEAHNSDEVEKLDTAEEDLKDKVEESAPVPDEQQASE
DHDLEVHHAVHNPAKAKEKAAQEKAAKEEAEEEAEANKKRHLNVVFIGHVDAGKSTIGGQ
ILFLSGQVDDRQIQKYEKEAKEKSRESWYMAYIMDTNEEERAKGKTVEVGRAHFETASTR
FTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVS
KLVVVVNKMDDPTVNWSKERYDEIEQKMVPFLKSSGYNTKKDVVFLPISGLMGFNMDKRM
DPKVCPWFSGPSFFEVLDSIEVPPRDPNGPFRMPIIDKFKDMGTVVMGKVESGSIREGDS
LVIMPNKEPVKVVAIYCDEDKVKRAGPGENLRVRITGIEDEDILSGFVLSSAVKPVPAVT
EFVAQLQILELLDNAIFTAGYKAILHIHAVVEECEIIELISQIDMKTRKPMKKKILFVKN
GAAVICRIQVTNSICVEKFSDFPQLGRFTLRTEGKTVAVGKVTALSSA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgaggctgacatccgcgcattacagcttgattcggcagaagaaaacaacgga
gttgttatcccggaagctcataactctgatgaagttgagaaattggatacagcagaagaa
gacctgaaagacaaggtggaagagtcagcaccggttcctgatgagcaacaagcttccgag
gatcatgatctagaagtgcaccatgcagtgcataacccagcgaaagctaaagagaaggca
gcccaagagaaggctgccaaagaggaagctgaagaagaggcagaagcaaacaagaaaaga
cacttgaacgtggtgttcatcgggcatgttgatgctggaaagtctacaattggaggacaa
attctcttccttagcggtcaggtggacgaccgacaaatccaaaagtatgaaaaagaagca
aaagaaaaaagtagagaaagctggtatatggcttatataatggatacaaatgaagaagag
agggcgaagggcaaaacagttgaagttggaagggctcattttgaaactgcgagtacgaga
tttaccattttggatgctccgggtcacaagagttatgtaccaaatatgattagtggagca
tctcaagcggacattggtgtactggtgatttcagctcgtaaaggtgaatttgaaacggga
tatgagaggggtgggcagacccgtgaacatgttcaacttgcaaaaacattgggcgtgtcg
aagctggttgtcgttgtgaacaaaatggatgatccaactgtgaactggtcgaaagagagg
tacgatgaaatagaacaaaaaatggtaccatttcttaaatcctctggctacaacacaaag
aaagatgttgtcttcttgcccatatctggtctaatggggtttaatatggacaagaggatg
gatccaaaagtttgtccttggttcagtggccctagcttttttgaagtcttggattcaatt
gaagttccgccacgagatcctaatggcccattcaggatgcccatcattgataaattcaaa
gacatgggaactgttgttatgggaaaagtagaatcgggcagcattcgggagggtgattcc
ttggtcattatgccaaataaggaacccgtgaaagttgttgcaatatattgtgatgaagat
aaagttaagcgtgctggaccgggtgagaatttgagagtccgtataactggcattgaggac
gaggatatcctttcaggttttgttttatccagcgcggtaaagcctgtacctgccgttact
gagttcgttgcccaattacaaatcctcgagctgctcgacaacgctatttttacagctggt
tacaaggctattctccacattcatgctgtggttgaggaatgtgagatcatcgaattgata
agccaaattgatatgaagacgaggaaacccatgaaaaagaaaattctgtttgtgaagaat
ggtgctgctgttatctgccgtatacaggttaccaattcaatctgtgttgaaaaattctca
gatttccctcaacttggaagattcactctacgaactgaagggaaaacagttgcggttgga
aaagtgactgcgctctcaagcgcttga
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