KEGG   Brassica napus (rape): 125575610
Entry
125575610         CDS       T04128                                 
Name
(RefSeq) cullin-4-like
  KO
K10609  cullin 4
Organism
bna  Brassica napus (rape)
Pathway
bna03420  Nucleotide excision repair
bna04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    125575610
  09124 Replication and repair
   03420 Nucleotide excision repair
    125575610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bna04121]
    125575610
   03400 DNA repair and recombination proteins [BR:bna03400]
    125575610
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bna04147]
    125575610
Ubiquitin system [BR:bna04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     125575610
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      125575610
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      125575610
Exosome [BR:bna04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   125575610
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 125575610
NCBI-ProteinID: XP_048623083
LinkDB
Position
C9:complement(22331687..22336812)
AA seq 790 aa
MSLPNKRSTCPAAASSASTTDSSYSSPPMKKSKNGLHTPSDKVPFPMEDEDPTPSAAANL
SRKKATLPQPTKKLVIKLNKAKPTLPTNFEDTTWDNLQSAIRAIFLKKPFSFDLERLYQA
VDDLCLHKLEGKLYERMQKECEEHISAALHSLVGQDTDLSVFLSLVEKCWQDFCDQMLMI
RSIALSLDRKYVIQNPNVRSLWEMGLQLFRKHLSLSPDVEQRTVTALLRMIEKERLAEAV
NRTLLSHLLKMFTALGIYSESFEKPFLECTSEFYAAEAMKYMQQYDVPEYLKHVEGRLHE
ENEKCILYIDASTRKPLISTVEKQLLERHIVAILDKGFTPLMDGRRTEDLQRMYTLFSRV
TALESMRQALSSYTRKTGQKIVMDEEKDKDMVQSLLDFKASLDIVWEDSFCKNESFGNTI
KDSFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELESTLEKVLVLFRFIQGKDVFE
AFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQ
SSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVKLPHELNVYQDIFKEFYLSKYSGRRLMW
QNSLGHCVLKADFSKGKKELAVSLFQAVVLMLFNDAMKLSFEDIKDSTGIEDKELRRTLQ
SLACGKVRVLQKYPKGRDVQDGDEFDFNDTFTAPLYRIKVNAIQMKETVEENTSTTERVF
QDRQYQIDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDK
TNPQIYNYLA
NT seq 2373 nt   +upstreamnt  +downstreamnt
atgtctcttccaaacaaacgctctacttgccccgcagccgcttcctcagcctccaccacc
gactcttcttattcttcccctcccatgaaaaaatccaaaaacggcctccacactccctcc
gataaggttcccttccccatggaggacgaagatccaaccccctccgccgcagccaatctc
tcccggaagaaggctacactcccccagcccactaagaagctcgtcatcaagctcaacaaa
gccaaaccaactctaccaacaaactttgaagacactacctgggataatctgcagtcagct
atcagagctatattcctcaaaaagcccttttctttcgacctcgagaggctttaccaggct
gttgatgacctttgcttgcataagctggaaggaaagctttacgaacggatgcagaaggag
tgtgaagagcacatctctgccgctttacattctttagttggccaagacaccgatctctct
gttttcttgtcgctcgttgagaaatgctggcaagatttctgtgaccagatgctcatgatc
cggagtatagccttgtctttggataggaagtatgttatacagaacccgaatgtacgttcg
ttgtgggagatgggccttcagctttttcggaagcatctttctctgtcccctgatgttgag
cagaggactgttactgctctcttgagaatgattgaaaaagaaaggttagccgaagctgtt
aataggacactactaagccatctcttaaagatgtttactgcactgggaatatattcggaa
agctttgagaaacctttccttgaatgcacttctgaattttatgctgctgaagcaatgaaa
tacatgcagcaatatgacgttcccgagtacctgaagcatgtcgagggaaggttgcatgaa
gagaatgaaaaatgcatactgtacatagatgcatcaaccaggaaaccattgatatcaact
gttgaaaaacaacttctcgagcgtcatatagttgctatccttgataagggtttcacacca
ttaatggatggacgtcgtactgaggacctccagaggatgtacacccttttttctagggtc
actgcacttgaatctatgaggcaggcgttaagttcctacactcggaaaactgggcagaag
atcgttatggatgaagagaaagataaagatatggtacaatcactattggacttcaaggct
tctcttgacatagtatgggaagacagcttttgcaagaatgaatcatttggcaacaccatt
aaagattcatttgagcatctgataaatctgcgccagaatcgtccagctgaacttatcgcc
aaatttttggacgagaagctccgtgctgggaacaagggtacttctgaagaagaattggag
agtacccttgagaaagtcttggttttgttcagatttatccagggtaaagatgtgttcgaa
gcattctataaaaaggatcttgcaaagagactcctgttgggaaaaagcgcttccattgat
gctgagaaatcaatgatctctaagctcaagactgagtgtggtagtcagtttacaaacaag
cttgaagggatgttcaaggatattgaattgtcaaaggaaatcaacgagtcattcaaacaa
tcgtctcaggccagaacaaaattgccatcaggaattgagatgagtgtccacgttctaaca
acagggtactggccaacatatccaccaatggatgttaaacttcctcatgagttaaatgtc
tatcaggatatcttcaaagagttctatttgagcaagtacagtgggaggaggttaatgtgg
caaaactcattaggtcactgtgttttgaaggcagatttctccaaaggtaaaaaggagctt
gctgtttccctgtttcaggctgttgtgttgatgttatttaacgatgcaatgaaacttagc
tttgaagacattaaagattccactggcatagaggacaaagaactgagaaggactcttcag
tcgcttgcttgtgggaaagttcgtgtcctgcagaagtatcccaagggaagagatgtacaa
gacggggatgaatttgattttaatgacacctttaccgctcctctgtatcgcattaaggtg
aatgcaatccagatgaaagagacggtagaagagaacacgagtacaacagagagagtattc
caggaccgacaataccagattgatgcagccattgttcgaatcatgaagacgagaaaagtc
ctgagccatactctcctaatcaccgagctcttccaacagctgaagttcccaataaaacca
gcggatctgaagaagaggatagaaagcctgatcgatcgagagtacttggagagggacaag
accaaccctcagatatataattatcttgcttag

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