Brassica napus (rape): 125575855
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Entry
125575855 CDS
T04128
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 27-like isoform X1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
125575855
03009 Ribosome biogenesis [BR:
bna03009
]
125575855
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125575855
Spliceosome [BR:
bna03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
125575855
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
90S particles
Helicases
125575855
Pre-60S particles
125575855
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
125575855
NCBI-ProteinID:
XP_048590950
LinkDB
All DBs
Position
A6:20134899..20137884
Genome browser
AA seq
623 aa
AA seq
DB search
MANLDMEQHSPEKEEMKTKTKTKKKRSRDKDKAKILKQLAKTEVKEPKAITDEEPKKKKK
KKLKQVAMEDEETKAINDEEPKKKKKKKAKQLEEEEEEDKVEESGGNGIMTNETFESLGL
SDNTHKSIKEMGFARMTQIQAKAIPPLMMGKDVLGAARTGSGKTLAFLIPAVELLYHVRF
TPRNGTGVIVICPTRELAIQSYLVAKELLKFHSQTVGKVIGGEPRKKEVEILVKGVNLLV
ATPGRLLDHLENTDGFVFKNLKFLVMDEADRILEQNFEEDMKKIIKLLPKVFYSHGLHTE
ATNDSIRTLCLNCLFYMLQTRQTSLFSATQTSKVEDLARVSLTSPVYIDVDEGRKEVTNE
GLEQGYCVVPSAKRLLFLLTFLKTFHGKKKIMVFFSTCKSTKFHTELFRYIKIDCLAIHG
GMEQSKRTSTFFQFVKLETGVLLCTNVGARGLDFPHVDWIVQYDPPDDPTEYIHRVGRTA
RGEGAKGKALLVLTPTELQFIQYLKAAKIPVEEHEFEEEKLLNVQAFLEKTISENSALSV
SAKEAYKTYISGYDSHSMKDVFNAHRLDLKEVAASFCFSSPPKVLLKIHREGDGYRSKRE
PVNNKFNRGRGGRPGGKTKFERY
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatttggatatggagcagcattcacccgaaaaggaagagatgaagacgaagacg
aagacgaagaagaaaagatccagagacaaagacaaagcgaagatactaaagcagctagcg
aagacggaggttaaagagccaaaagcaataacagatgaagaacccaagaagaaaaagaag
aagaaactaaagcaggttgcgatggaggatgaagagaccaaagcaattaacgatgaagaa
ccaaagaagaagaagaagaagaaagcgaagcagctcgaagaagaagaagaagaagacaaa
gtggaggaaagtggtggaaacggtataatgaccaacgaaacgtttgagtcattggggcta
tctgataacactcataaatccatcaaagagatgggattcgcacgcatgactcagattcaa
gctaaagcgattccgccgttgatgatggggaaagatgtactcggagctgccagaaccggt
tccggaaagaccttagcttttcttatacctgctgtagagcttctttaccatgtccggttt
actcctcgcaatggaaccggtgttattgtgatttgtccaacaagagagcttgccattcag
tcatatttagtggcgaaggagcttcttaagttccattctcagaccgtgggaaaggttatt
ggtggtgagcccagaaagaaagaagttgaaattcttgtcaaaggtgttaatctgttggta
gctacccctggaagacttctcgatcaccttgagaatactgatggatttgtgttcaagaac
ttgaagtttcttgtgatggatgaggctgataggatactggaacagaactttgaagaagat
atgaagaagatcattaagcttctaccaaaggtattctattctcacggcttgcatactgaa
gcaactaatgattcaataaggacactgtgtctaaattgtcttttttatatgctgcagaca
aggcagacttcattattttccgccacacagacttccaaggttgaggatcttgctcgtgtg
tcacttacatcacctgtttatattgatgtggacgaaggacgaaaagaggttacaaatgaa
ggcttggagcaaggttactgcgttgtgccaagtgcgaagcggttactcttcttactcacc
ttcttgaagacgtttcatgggaagaagaagatcatggtgtttttctccacttgcaaatcg
acaaagtttcacacggaactctttcggtacatcaaaatagattgcctcgccatccatgga
gggatggagcagagcaaaaggacttcgacgtttttccagttcgtaaagttggaaactggt
gtcttattgtgtactaatgtaggtgcccgtggtctcgactttccccatgtggattggatt
gtgcagtatgatcctccagatgatcctacggaatacattcatagagtaggtagaacagct
cgtggagagggtgcaaaagggaaggctctgcttgttctaactccaacggagttgcaattt
attcagtatctcaaggctgcgaagattcctgttgaagaacatgaattcgaggaagagaag
ttgctcaatgtgcaggcttttctggaaaagacgatatctgaaaacagtgcattgagcgtg
tcagcaaaagaagcatacaagacttacatatcaggatatgattctcactctatgaaagat
gtctttaatgctcaccgtctcgatctcaaggaggttgcggcttcgttctgtttctcatca
ccaccgaaagtattgttgaagatacatcgagaaggagacgggtacaggagcaagagagaa
ccggttaataataagtttaacagaggtcgtggtggtagacccggcggtaaaactaagttc
gaaaggtactaa
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