Brassica napus (rape): 125576575
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Entry
125576575 CDS
T04128
Name
(RefSeq) COP1-interactive protein 1-like
Organism
bna
Brassica napus (rape)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
PUMA_CC
AAA_13
Crescentin
KIP1
Fez1
Tropomyosin
Mod_r
HOOK
APG6_N
Filament
DUF7491
Motif
Other DBs
NCBI-GeneID:
125576575
NCBI-ProteinID:
XP_048592921
LinkDB
All DBs
Position
A7:16363669..16370674
Genome browser
AA seq
1594 aa
AA seq
DB search
MRKHRFRETLKSFFEPHFDHEKDEMLKVTKSEIDEKVKKILGMVESGNIDEDKSKRQVVS
ELVNELHKEYQSLYDITGEIRKKVHEKGENSSSSSSDSDSDHSSRRETKKNGKVAKDDLK
QQIETADHEIANLKNKLTTSVEEKEAVDSELEAALVKLKESEEIISNLKLETEKLEGEKT
TALSDSRELLQKLEVAGRTETDLNQKLEDMKKERDQLQTEIDNGIKRFQEAEKIAEDWKT
TSDQLKDEATNFKQQLEAAEQRVSDLNRGMSSAEEENKSLSLKVTEISGEIQQAQNTIQE
LTSELGEVKEKYKEKESQHSSLVELHETHEKESSSQVKDLEARVESSEKLIVDLNQNLNN
AEEEKKLLSQRISEISNEIQKAENTIQELMSQSEQLKESHSVKEREIFGLRDIHETHQRE
SSTRTSELEAQLESSEKRVSDLSASLKAAEDENKAISSKNVETLDKLEEAQKTINELMAE
LEELKDRHKEKESELSSLVEVHEAHQRDSTSRVKELVQVVESAEQQVADMKQNLNNAEEE
KKLLSQRISEISNEIQEAQNTIQELKSESGQLKESHGEKERELSGLRDMHETHQRESTTR
VSELEAQLESSEQRVSDMSASLKAAEEENKAISSKILETTDKLEQAQNTIQELIAELGEM
KERYKEKETEHSSLMELHETQLRESASHVKELEAQVESSEKLVADLNQSLNNAEEEKKLL
SQKISEISNEIQEAQNTIQELVSETEQLKESHNVKEREFSGLRDIHETHQRESSTRTSEL
EAQLKSSEQRVSELNASLNVAEEESKSMSSKILETTDELKQTQNKVQELMAELAESKDIH
IQKESELSSLVEVHEAHKRVSSSRVKELEALVESAEQRVKDLNQSLNSAEEEKKILSQRI
SEMSNEIKQAENTIQELMSESGQLKESHSEKDKELFSLRDIHETHQRDSSTQLRDLEAQL
KSSEQRVSDLIESLKIAEEENKTMSTKISDTSGELERVQITLQELTAESSKLKEQLAEKE
AELVHLKEKESKSQLQIKELEATVATHELELQSVRARTVDLETEIVGKTTEIEQLEAQNR
EMVARISELEKTMDERGTELTALTQKLEDNEKHSSSTIESLTAEIDGLRAGLDSVSLQKE
ELEKLMESKGNEASMQIKGLMDEINGLGQKVASLESQKAELEIQLERKSEESSEYMSQIT
NLKDEIISKVKDHDNILEERNGLSEKIKGLEVEIETLQKQRSELDEELRTKTEEIVQMRD
KINDASAETVALTEQINNLQDELDSLQVKKSETEAELDREKQEKSELSNQIIDVKRALVE
QETAYNTLGEEHNQISQLLKEREEILNKLAEDHKEAQRLLEETGHEVTSRDSAIAGHEET
MESLRNELEMKGEEIETLMEKISNIEVKLRLSNQKLRVTEQVLTEKEEAFRREEARHIEE
QALLEKNLKVTHETYRGMIKEMAEKVNTTLDGFQSMSGKITEKQGKYEKTVMEASKLLWT
ATNWMIERNHEMEKMKKGMERKEEEIKKLGEKVREDEKEKETMKETLMGLGEEKREAIRQ
LCIWIDHHRGRCEYLEEILSKTVVARGQRQSQRA
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagcaccggtttagagagaccttgaagtctttctttgagcctcattttgatcat
gagaaagatgaaatgcttaaagtaaccaaatctgaaatagatgaaaaggtgaagaaaatc
ttgggaatggttgagagtggaaacatcgatgaagataaatctaaaagacaagtggtttca
gagttagtgaatgaactccacaaggagtaccagtctctatatgatataacgggagagatt
aggaaaaaggtccacgagaaaggagaaaactcttcttcatcgagctcagactcggattct
gaccattcttcgaggagggagaccaagaaaaatggaaaagtagcgaaagatgacttgaag
caacaaatcgaaactgcggatcatgagattgctaatctgaaaaataagttgacaacgagt
gttgaagaaaaagaagcagtagattccgagcttgaagcagctttggtgaagttaaaagaa
tcagaagagatcatcagcaatttgaaacttgaaactgagaagttagaaggcgaaaagaca
acagctctgagtgatagcagagaactacttcagaaactggaagttgctggcagaacagaa
actgatctgaaccagaagttagaagatatgaaaaaagaaagagatcaactgcaaactgag
atagacaatggtatcaaaagatttcaagaagctgagaaaattgcagaagactggaaaaca
acgagtgatcaactcaaagatgaagctactaatttcaagcagcagctagaagcagcagaa
cagagagtttctgatctgaaccgcggaatgagtagtgcagaggaagagaacaaatctcta
tccttgaaagttacggagatttcaggtgagatccaacaggcacagaacaccatacaagaa
ctcacttccgaattgggagaggtgaaagaaaaatacaaggaaaaagagagtcagcactct
agtttggtggagttacatgagacccatgagaaagaatcatccagtcaagtgaaagactta
gaagcacgagtagaatcatcagagaagttgattgtagacttgaaccaaaacttgaataat
gcagaagaagagaagaaactgctctctcaaagaatctcagaaatctctaacgagatacaa
aaggcggagaacaccatacaagaactcatgtctcagtctgaacagttgaaagagagccac
agtgtgaaggagagagaaattttcggtttgagggacatccatgagactcatcagagagaa
tcatccacccgtacgagtgaattagaagctcaactggaatcctcagagaagcgggtctca
gatttaagtgcgagcctgaaggctgcagaggacgaaaacaaagctatctcctcgaaaaat
gttgaaactctagacaagctagaggaggcgcagaagacgataaatgaactcatggctgag
ttggaagagttgaaagaccgacacaaagagaaagagagcgagctttctagtctggtggag
gtacacgaagcacatcagagagattcaacaagccgagtaaaagaattagtacaagtggtg
gaatcagcggagcaacaggttgcagatatgaaacagaatttgaacaatgcggaggaagag
aagaaactgctctctcaaagaatctcagaaatctctaacgagattcaagaggcacaaaac
accatacaagaactcaagtcagagtctggacagttgaaagagagccacggtgagaaagag
agggaactttctggtttgagagatatgcacgagactcatcaaagagaatcaaccacacga
gtgagtgaattagaagctcaactagaatcatcagaacagcgcgtctcagatatgagtgcg
agtctgaaggctgcagaggaagaaaacaaagctatttcctcgaaaatattggaaactaca
gacaagctcgaacaggcacaaaacacaattcaagaactaatcgctgaattgggagagatg
aaagaaaggtacaaggaaaaggagactgagcattccagtttgatggagttacatgagacc
cagcttagagaatcagcgagtcatgtcaaagaattagaagctcaagtggaatcatcagag
aaattggttgcagatttgaaccaaagcctgaacaatgcagaggaagagaagaaactgctc
tctcagaaaatatcagaaatttccaacgagattcaagaggcgcagaacacgatacaagaa
ctcgtgtctgagactgaacagttgaaagagagccacaatgtgaaagaaagagaattttct
ggtttgagggacatccacgagactcatcagagagaatcatccacacgcacgagtgagtta
gaagctcaactgaaatcatcagaacagcgggtctcagagttgaatgcgagtctgaatgtt
gcagaggaagaaagcaaatccatgtcttccaagatcttggaaactacagacgagctcaaa
cagacgcagaacaaggtacaagaactaatggctgaattggcagagtcgaaagatatacac
atacaaaaagaaagtgagctttctagtttggtggaggtacacgaggcacataagagagtc
tcatcgagtcgagtgaaagaattagaagcactggtggaatcagcagagcaacgagttaaa
gatttgaaccagagcttgaacagtgctgaggaggagaagaaaatcttatctcagcgaatt
tcagaaatgtcgaatgagattaagcaggcggagaacaccatacaagaactcatgtctgag
tctggacagttaaaagagagccacagtgagaaagacaaggaacttttcagtttgagggat
atccatgagactcatcagagagattcatccactcaactgagagatttagaagcgcaactg
aagtcatcggaacaaagggtttctgatctgattgaaagtctgaagattgcagaggaagaa
aacaaaaccatgtcgactaaaatctcagatacttcaggggagctcgaaagggtacagatc
acgttacaggaactcacagctgagtcaagcaaactgaaagagcagcttgctgagaaagaa
gcagaacttgtacatctgaaagagaaggaaagcaaatcacagttgcaaataaaagaacta
gaagcaacagtagcgacccatgagctggagctacagtcagttcgtgctcgtacagtagat
cttgagacagagattgtaggcaagaccactgaaattgagcaactggaagcgcaaaacaga
gaaatggttgctagaatctcggaacttgagaagacaatggacgagagaggtactgaactc
actgctttaacccaaaaacttgaggataacgagaagcattcatcgtccacaattgagagt
ttgacagctgagatcgatggcctacgggcaggactagattcagtgtctcttcaaaaggag
gagttagagaaactaatggagagcaaaggcaatgaagcttcaatgcagattaagggtttg
atggatgagatcaatggtctgggccagaaagtggcgtcacttgaaagccagaaagcagaa
cttgagatccaacttgagaggaagtccgaggagagctctgaatatatgagtcagattaca
aatctaaaagatgagatcataagcaaggtcaaagatcacgataatattctagaagagaga
aatggtttatctgagaagatcaagggtcttgaagttgagatagagactctacagaaacag
agaagtgagcttgacgaagagctaagaactaaaacagaagagatcgttcaaatgcgcgat
aagattaacgacgcatctgctgaaacagtggccttaacagaacagatcaacaatctgcag
gatgaacttgattcactgcaggtgaagaagagtgagaccgaagcagagcttgatagagag
aagcaagagaaatcagaattgtctaatcagatcattgatgtcaaaagagcattggtagag
caagaaactgcttacaatacactgggagaggaacacaaccagatcagccaactgttaaaa
gaacgtgaggagatacttaataagctagcagaggatcacaaagaagcccaaagattgctg
gaggaaacaggtcatgaagtaacatccagagactcagcaatcgcaggtcatgaagaaacg
atggagagtttacgtaacgagctagaaatgaaaggagaggagatagaaactctcatggag
aaaatcagtaacatcgaggttaagcttcgtttatcgaaccagaaactgagggtaactgaa
caagtgttaacagagaaagaggaagctttcaggagagaagaagctaggcacatagaggaa
caagcattgcttgagaaaaaccttaaggtgactcatgaaacatatcgaggtatgataaaa
gagatggctgagaaagtgaacacaacacttgatgggtttcaatcaatgtcgggaaaaatc
acggagaagcaagggaagtacgagaaaacggtgatggaggcatctaaattactgtggact
gctacgaattggatgattgagaggaatcacgagatggagaagatgaagaaagggatggag
aggaaagaagaggagataaagaagcttggagaaaaggtaagagaagatgaaaaggagaag
gagacaatgaaggagactttgatgggacttggagaagagaaaagagaagcaataaggcaa
ttatgtatttggattgatcaccatagaggtcgctgtgaatatcttgaagagattttgtct
aagaccgttgtggctcgagggcaaagacagtcgcagcgagcctaa
DBGET
integrated database retrieval system