Brassica napus (rape): 125577146
Help
Entry
125577146 CDS
T04128
Name
(RefSeq) putative RING-type E3 ubiquitin transferase C3H69
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
125577146
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125577146
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125577146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH_4
zf-CCCH
Torus
zf-CCCH_2
zf-CCCH_DUS3L
zf-CCCH_RBM22
zf-C3HC4
zf-RING_2
zf-CCCH_3
zf-RING_5
RING_XB3-XBAT31
zf-CCCH_9
IBR_1
zf-CCCH_PARP12
zf-RING_UBOX
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
125577146
NCBI-ProteinID:
XP_048594000
LinkDB
All DBs
Position
A8:19408460..19411433
Genome browser
AA seq
325 aa
AA seq
DB search
MSKRILCKFFAHGACLKGDNCEFSHDWKDPSNNICTFYQRGNCSYGSRCRYEHVKPSRPP
HPSPASSSTYLSSPFVSQRDLSSSPAWTLASLDDEVNNTDTTKPEDQPICSYAAAGDCPR
GDQCPHIHGDLCPTCQKHCLHPFRPEEREEHKRSCEKKHKQLEALKLSQDVECCVCLERV
LSKPTPSERKFGILTECDHAFCIGCIRNWRSSSPSTGMDVNSTLRACPICRKLSYFVVPS
VIWFSDPDEKKEIVDNYRDKLRSIDCKHFNFGDGNCPFGTSCFYKHAFHDGRLEEVVLRH
LDAEDGQTVIAKDIRLSDFLENMHI
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagaatcctttgcaagttctttgctcacggtgcttgcttaaaaggagacaac
tgtgagttctcacatgactggaaggatccttcaaacaatatttgcaccttctaccaaaga
ggcaactgctcttacggaagcagatgcaggtacgaacatgtcaaaccttctcgccctcct
cacccatctcctgcttcctcttccacctacctatcttctccctttgtttcccaaagagat
ttaagctcatcaccagcgtggactttggcttccttagacgatgaggtcaacaacactgac
acaaccaaaccagaagaccaacccatctgctcatacgccgcagctggcgactgcccacgc
ggcgaccaatgcccccacatccacggagacctctgcccaacgtgtcagaaacattgcttg
catcccttcagaccagaggagagagaggagcacaagagatcgtgcgagaagaagcacaag
cagctcgaagcgttgaagcttagccaggacgtggagtgctgcgtctgtttggagcgtgtg
ctctctaagccgactccttccgaacggaagttcgggatactcactgagtgtgatcacgct
ttctgcatagggtgcatcaggaactggcgtagcagctctccttctactggtatggatgtc
aacagcacgctgagggcttgccccatatgccgcaagctgtcatactttgttgttcctagt
gtcatctggttctcagatcctgatgagaaaaaggaaattgtggataactacagggacaag
ctcaggtcaattgattgtaagcacttcaattttggagatgggaactgtccgtttggaaca
agttgcttctacaagcatgcgtttcatgatggtcggttggaggaagtggttctaaggcat
ctggatgcagaagatgggcagactgtgatagctaaagatataaggttgtctgactttctt
gagaatatgcacatatga
DBGET
integrated database retrieval system
