KEGG   Brassica napus (rape): 125577149
Entry
125577149         CDS       T04128                                 
Name
(RefSeq) serine hydroxymethyltransferase 6-like
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
bna  Brassica napus (rape)
Pathway
bna00260  Glycine, serine and threonine metabolism
bna00460  Cyanoamino acid metabolism
bna00630  Glyoxylate and dicarboxylate metabolism
bna00670  One carbon pool by folate
bna01100  Metabolic pathways
bna01110  Biosynthesis of secondary metabolites
bna01200  Carbon metabolism
bna01230  Biosynthesis of amino acids
bna01240  Biosynthesis of cofactors
bna04981  Folate transport and metabolism
Module
bna_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    125577149
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    125577149
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    125577149
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    125577149
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    125577149
Enzymes [BR:bna01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     125577149
SSDB
Motif
Pfam: SHMT Beta_elim_lyase
Other DBs
NCBI-GeneID: 125577149
NCBI-ProteinID: XP_048594010
LinkDB
Position
A8:complement(19452722..19455165)
AA seq 571 aa
MDRAQSDLSLGFGSSHALPLPPPRNPIADDSITLQLLEQRFDAPRSRTRAVLDKDENFED
EDVDGDDQREDFILLGQPMKLKRSRPSSSTSSPTPCKRLARRSLVKAWGNEPLSEADPDL
HELMEKEKQRQFRGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNNYIDQIE
TLCQERALQAFGLHHEQWGVNVQPYSCTSANFAVFAGLLSPGERIMGLDSPSGGHMSHGY
YTPGGKKVSGASIFFESFPYKVDPRTGYIDYEKLEEKALDFRPKILICGGSSYPRDWEFP
RFRFIADKCGAVLMFDMAQISGLVAAKEAPNPFEYCDIVTSTTHKSLRGPRGGIIFYRRG
FKANKKQSINLNQCEGNVQYDFEEKINFSVFPSLQGGPHNNHIAALAIALKQAASPEYKL
YMRQVKKNAKALASALISRKCKLVTGGTDNHLLLWDLTPLGLTGKVYEKVCEMCHITVNK
VAIFSENGVISPGGVRIGSPAMTSRGCLEQDFETMAEFLYRAAQIASAALREHGKLQKEP
LKSIYHCKDIADLRNQVEAFASKFAMPAFEI
NT seq 1716 nt   +upstreamnt  +downstreamnt
atggaccgtgctcaatcggatctctccttaggtttcggcagctcccacgccttacctcta
cctcccccgagaaacccaatcgctgacgactcaatcacgcttcagctcctcgagcagaga
ttcgatgccccccgatctcgtacccgagccgtcctcgataaagacgaaaactttgaagac
gaggacgttgatggcgacgatcagagggaagatttcatcctcttaggtcagcccatgaag
cttaaacggagcagacccagcagctccacgtcatcaccaaccccttgtaagcgcttagct
agacgatcccttgttaaagcttggggcaacgagccgctctcagaagctgatccagacctc
cacgagctcatggagaaggagaagcaaagacagttcagaggaatcgaactcatagcttcc
gagaatttcgtctgcagagctgtaatggaagctttgggaagccatttaaccaacaagtac
tcagaaggcatgcctggagcgagatactacacagggaacaactacattgatcagattgag
actctctgccaagaacgtgccctgcaagctttcggacttcaccacgagcaatggggagtc
aacgtgcagccgtactcctgcacctccgcgaacttcgctgtcttcgccggtcttttgtcg
ccgggggagaggatcatggggttggattctccttcaggtggtcacatgagtcatggttac
tacacgccaggtgggaagaaagtctctggcgcgtctatcttctttgagagcttcccctat
aaggtggaccctcgtacagggtacattgactacgagaagcttgaggagaaggcgcttgac
tttcgtcccaagatacttatatgcggaggtagttcatatcccagagactgggagtttcct
aggtttaggtttattgcagataaatgtggagctgttttgatgtttgacatggcgcaaatc
agcggtcttgtggctgccaaggaagctccaaatccgtttgagtattgcgatattgttacc
tcgacaacgcataagtctctccgtggacctagaggcggtattatattttataggagaggg
tttaaggctaataagaagcaaagcattaatcttaatcaatgtgagggcaatgtccaatat
gattttgaagagaagataaacttttctgtcttcccatcgctgcaaggaggacctcacaat
aaccatatagctgctctagctattgctctcaagcaggccgcttcgccggagtacaagttg
tacatgagacaggtcaagaaaaacgctaaggctttagcgtctgctttgataagcagaaag
tgcaagttggtaacaggtggcactgataatcatttgcttctttgggacctgactcctttg
ggcttgacaggcaaggtgtatgagaaagtatgcgagatgtgtcatatcacggtcaacaaa
gttgctattttcagcgaaaatggtgttatttctcctggaggagtgaggataggtagtccg
gctatgacctcaagaggttgtctagaacaagattttgagacaatggctgagtttctgtat
agagctgctcagatagcaagtgctgcactaagggagcatgggaagttgcagaaggagccg
ctcaaaagcatatatcactgtaaagacattgcagatcttaggaaccaagtggaggcgttt
gcttctaagtttgcaatgcctgcatttgagatttga

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