Brassica napus (rape): 125577226
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Entry
125577226 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
125577226
04121 Ubiquitin system [BR:
bna04121
]
125577226
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125577226
Membrane trafficking [BR:
bna04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
125577226
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125577226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
Zf_IFT144_1st
zf-ANAPC11
zf-RING_5
zf-HC5HC2H
zf-RING_10
HypA
Motif
Other DBs
NCBI-GeneID:
125577226
NCBI-ProteinID:
XP_048594363
LinkDB
All DBs
Position
A8:443980..445558
Genome browser
AA seq
322 aa
AA seq
DB search
METCSREESINQTMEEEEAAVAYWCHMCSRTVDPLMEAETKCPFCASGFVEEMAEEQEQE
HSPITNSLLAPILMQVINESSLRTSNQSVDEDAQTESGNDVDSQLQEILRRRRARRSVSV
MPLLDGDGDGDRERGSLIVVSGASLSEYFIGPGFEALLQRLTDNDPNRYGTPPAQKEAVE
ALASVKILEPTLQCSVCLDEFEIGVEAKEMPCEHKFHGECLLPWLELHSSCPVCRYELPS
DETKTETARTQPNGDGGGSESSSFSSIQEGSENSDGSHHPEEEEEEDSDDDGDDGVEFSI
PWLLSSLFSSSQDSSNPSSGTH
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggagacttgttctagggaggaatcaatcaatcaaaccatggaagaagaagaagctgca
gttgcatactggtgccacatgtgctctcgaactgtggatccactaatggaagctgagacc
aaatgccccttttgcgctagtggctttgttgaagagatggccgaggaacaagaacaagaa
cactctccaattaccaattctctcttggctcccatcttgatgcaagtcatcaatgaatct
tccctccgcacaagcaaccaaagtgttgatgaagatgctcaaaccgaatctggaaacgat
gtggattctcagctccaagagattctcaggaggagaagggcaagacgttccgtttccgtt
atgccattacttgatggtgatggtgatggtgacagagagagaggaagcttgatcgtggtc
tctggtgcttctttgagtgagtatttcatcggtcctggcttcgaagccctgcttcagcgt
ttaacagataacgatcccaacagatacggaacacctcctgctcaaaaagaagctgttgag
gctttggctagcgtcaaaatcctggagcctactctgcagtgttcggtttgtttggatgaa
tttgagattggggtggaagccaaagagatgccttgtgagcacaagtttcacggcgaatgc
ttgctcccgtggctcgagcttcatagttcctgtccggtttgtaggtacgagttaccttcg
gacgagacaaagacggagactgcaagaacacaaccaaatggtgacggtggtggaagtgag
tcttcttctttttcaagcatccaagaaggaagtgagaatagcgatggaagtcaccaccct
gaggaggaggaggaagaggacagcgatgatgatggtgatgatggggttgaattctcaatc
ccgtggctgcttagcagcttgttctcgtcatcccaagacagcagcaatccatcgagtggt
acacactga
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