Brassica napus (rape): 125577231
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Entry
125577231 CDS
T04128
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bna
Brassica napus (rape)
Pathway
bna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125577231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
125577231
03110 Chaperones and folding catalysts [BR:
bna03110
]
125577231
03029 Mitochondrial biogenesis [BR:
bna03029
]
125577231
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
125577231
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
125577231
Messenger RNA biogenesis [BR:
bna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
125577231
Chaperones and folding catalysts [BR:
bna03110
]
Heat shock proteins
HSP60 / Chaperonin
125577231
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
125577231
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125577231
Exosomal proteins of other body fluids (saliva and urine)
125577231
Exosomal proteins of breast cancer cells
125577231
Exosomal proteins of colorectal cancer cells
125577231
Exosomal proteins of bladder cancer cells
125577231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
125577231
NCBI-ProteinID:
XP_048594370
LinkDB
All DBs
Position
A8:493371..496982
Genome browser
AA seq
631 aa
AA seq
DB search
MLLCLCLVLLCWIRFCSKLFNIHFYEDFGEKMASTFTATSSIGSMVAPNAHKTDKKLMNK
LSSSSFGRRQNVFPKLRRSSPAVVCAAKELHFNKDGTTIRKLQAGVNKLADLVGVTLGPK
GRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVV
LAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVAELKKMSKEVEDSELADVAAVSAGNN
AEIGSMIAEAMSRVGRKGVVTLEEGKSAENALYVVEGMQFDRGYVSPYFVTDSEKMSVEF
DNCKLLLVDKKITNARDLVGVLEDAIRGGYPILIIAEDIEQEALATLVVNKLRGTLKIAA
LKAPGFGERKSQYLDDIAILTGATVIREEVGLSLDKAGKEVLGHAAKVVLTKETSTIVGD
GSTQDAVQKRVTQIKNLIEQAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLR
VEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKAALDNDEEKVGADIVKRALSYPLKL
IAKNAGVNGSVVSEKVLSNDNVKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAK
TFLMSDCVVVEIKEPEPVPVGNPMDNSGYGY
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgcttctgtgtctatgtttggtgttgttatgttggataagattttgctctaagcttttt
aatatccatttctatgaagattttggtgaaaagatggcatcaaccttcactgcaacgtct
tccattggctccatggttgctccaaatgcccacaaaacggataagaagcttatgaacaag
ttgtcttcaagctctttcgggaggaggcagaacgtgttccccaagctcagaagatccagt
cctgcagttgtatgtgcagccaaggagttgcatttcaacaaagacgggactaccatcagg
aagcttcaagctggtgtcaacaagcttgcagaccttgttggtgttacacttggacctaaa
gggcgaaatgttgttcttgagagcaagtatggatcgccaagaattgttaatgatggtgtg
actgttgcaagggaggttgaattggaagaccctgttgagaacattggtgctaaacttgtt
aggcaagcagctgccaagaccaatgacctggccggtgatggtaccacaacatctgtggtt
cttgcacaaggttttattgctgagggtgtcaaggtggtggctgctggtgcaaaccctgta
ttgatcactagaggcattgagaagacagcaaaggctttggtagccgagctcaagaaaatg
tctaaagaggttgaagacagtgagcttgcggatgtggcagctgttagtgcgggtaacaat
gcagaaattggaagtatgatcgctgaagcaatgagcagagtgggcaggaagggtgtggtg
acacttgaggagggtaaaagtgccgagaacgctctctacgtagtggaaggaatgcagttt
gatcgcggttatgtctctccttactttgtgacagacagtgagaaaatgtcagtggagttc
gacaattgcaagttgcttcttgttgacaagaaaattaccaacgcaagggatcttgttggt
gttctggaggatgcaattagaggaggatacccaattttaattatcgcagaagacattgag
caggaggcgttagcgacccttgttgttaataagcttagaggcacactgaagattgcagct
ctcaaagcaccaggatttggagagcgcaagagccaataccttgatgatattgccatcctc
actggagcgactgtgattcgtgaggaagttggtctttcacttgacaaagctggaaaagag
gttcttggacatgcagcaaaggttgtcctcactaaggagacttcgaccattgtgggtgat
gggagcacacaagacgcagtgcaaaagcgtgttacacaaattaagaaccttattgagcaa
gcagagcaagactatgagaaggaaaaattgaatgagagaattgcaaagctctctggtgga
gttgctgtgattcaggtcggagcacaaactgagacagaactcaaagagaagaaactgaga
gttgaagatgctcttaatgctacaaaggctgctgttgaggaaggaattgtcgttggtggt
ggttgtactctgcttcgtcttgcttccaaggttgatgccattaaagccgcccttgacaat
gatgaagaaaaggttggagcggacattgtgaaaagagcactgagttaccctctgaaactg
attgccaagaatgcaggagtaaatggaagcgtagttagcgagaaggtgctttctaacgat
aatgtgaagttcggttacaatgctgcaaccggcaagtacgaggatctaatggctgcagga
atcatcgatccaactaaggttgtgagatgttgcttggaacatgcagcttcggttgcaaag
acattcttgatgtctgactgtgtcgttgttgagatcaaggagcctgagccagttcccgta
ggcaacccaatggacaactcaggatatggatactga
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