Brassica napus (rape): 125577302
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Entry
125577302 CDS
T04128
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.17-like
KO
K14487
auxin responsive GH3 gene family
Organism
bna
Brassica napus (rape)
Pathway
bna04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
125577302
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
125577302
NCBI-ProteinID:
XP_048594589
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Position
A8:complement(10001842..10009363)
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AA seq
605 aa
AA seq
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MIPSYDPNDTEAGLQLLEDLTTNADAIQQQVLHQILSQNSETEYLRSFLDGESCNIQENF
KNKAPVVNYEDIKPFIQRISDGDSSDILSAQPITELLTSSGTSGGKPKFMPSTAEELDRK
TFFYNMLVPVMNKFVNGLDEGKGMYLLFIKPEIKTPAGLQARPVLTSYYKSEQFKNRPFN
KYNVITSPNDAILCEDSQQSMYCQLLCGLVQRSHVLRLGAIFASAFLRAVKFLENHFTEL
CADIRTGTVASWITDSGCRDSALSILNGPNQELADEIEALFNAKSREGILKRIWPKTKYI
EVIVTGSMAQYIPTLEFYSGGLPLVSVMYASSECFFGLNINPLCKPSDVSYTLLPNMAYF
EFLPVDDKSHEETQLESRSTDDVSLTEKDRIVDLVSVEIGRYYELIITTFAGLYRYRVGD
ILKVTGFHNKAPQFSFVERRNVVLSIDTDKTSEEDLMKAVTQAKLNHLQGLFLLTEYTSY
ADTSSIPGHYVLFWELKPRYDNDPPKLDKKMMEDCCSEVEDCLDYVYRRCRNKDRSIGAL
EIRVVSLGTFDALMDFSISQGSSVNQYKTPRCVKSGGALQILDSRVIGRFFTKRVPQWEP
LGLDS
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgataccaagttatgatccaaacgatacagaggctggtctccagcttcttgaggatcta
accacaaatgctgatgcaattcaacaacaagttctccaccaaatactctctcaaaactca
gaaaccgaatatctcaggtcgtttcttgatggagaatcttgcaatattcaagaaaatttc
aagaacaaagcccctgtggtaaattatgaagacataaagcccttcatccaacgaatctct
gatggagactcatccgatatcctctctgctcaacccatcactgagcttctcacaagctcg
gggacttcgggtggaaaaccaaaatttatgccttctacagctgaagagttggatagaaag
acatttttctacaatatgcttgtgcccgtcatgaataagtttgtgaatgggcttgatgaa
ggaaaaggaatgtaccttttgttcataaaaccagagatcaagactcctgctggtctacag
gcacgtcctgtgttaaccagttactacaaaagtgaacaattcaagaacaggcctttcaac
aagtacaatgtcatcactagccctaacgatgccattctttgtgaagacagccagcaaagc
atgtactgtcagcttctttgcggtttagtccagcgatctcatgtcctaagactcggtgct
atcttcgcttccgcctttcttcgagcggtcaagttcttggagaatcatttcaccgagctg
tgtgctgacattagaaccggtactgtcgctagctggatcactgactcgggctgtagagac
tcggctttgtcaatccttaacggtcctaaccaagaactggctgatgagatcgaggctttg
ttcaatgcgaagtcgcgggaaggaatcttgaaaaggatttggcctaagacgaagtatatt
gaggtgattgtgaccggatcgatggctcagtatattccgacactcgagttttatagcgga
ggtttgcctttggtttcggttatgtatgcttcctctgagtgtttctttggtctcaacatc
aatcctctgtgtaagccatccgatgtttcttacacacttcttcctaacatggcttacttt
gagttcttgcctgttgatgataagtctcatgaagagactcaacttgaatcgcgttctacg
gatgatgtttcccttacggagaaagaccgtattgtcgatcttgtcagtgtggaaattgga
cggtactatgaactcatcatcacaacattcgcaggtttatacagatacagagttggagat
atcctaaaggtgacaggtttccacaacaaggcaccccaattcagtttcgtggagcgaaga
aacgttgtgttaagcatcgacacagacaaaaccagcgaagaagatctcatgaaggcagtg
acacaagccaaactcaaccatctccaaggtctcttcttgctcaccgagtacacgagctat
gcggacacgtcatcaatcccagggcattacgtgctcttctgggagctgaagccacgttac
gacaatgacccaccaaagctagacaagaagatgatggaggactgttgctctgaggtggag
gattgtctggattacgtgtacaggaggtgcaggaacaaagatagatcaataggggctttg
gagataagagtggtgagtttgggtacttttgatgccttaatggactttagcatctcacaa
ggatcttcagtgaatcagtacaagacaccaagatgtgttaaatctggaggagctcttcag
attcttgattccagagttattgggaggttctttaccaagagagttcctcagtgggagcca
cttggtttagattcatag
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