Brassica napus (rape): 125577816
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Entry
125577816 CDS
T04128
Name
(RefSeq) long chain acyl-CoA synthetase 3
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bna
Brassica napus (rape)
Pathway
bna00061
Fatty acid biosynthesis
bna00071
Fatty acid degradation
bna01100
Metabolic pathways
bna01212
Fatty acid metabolism
bna04146
Peroxisome
Module
bna_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
125577816
00071 Fatty acid degradation
125577816
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125577816
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bna01004
]
125577816
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
125577816
Enzymes [BR:
bna01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
125577816
Lipid biosynthesis proteins [BR:
bna01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
125577816
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of breast milk
125577816
Exosomal proteins of breast cancer cells
125577816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
125577816
NCBI-ProteinID:
XP_048595678
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Position
A9:complement(8249533..8255280)
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AA seq
660 aa
AA seq
DB search
MATDRFIVEVEKGKEGVDGGSPSVGSVYRSIYAKDGFPEPADDLLSCWDIFRLSAEKSPD
NPMLGRREIVDGKAGKYVWQTYKEVYDIVIKLGNSIRTIGVGKGEKCGIYGANSPEWIIS
MEACNAHGLYCVPLYDTLGAGAIEFIICHAEVSLAFSEEKKISELLKTAPNSTKYLKNIV
SFGEVSNVQRAEAERHGLSIYSWDQFLKLGEGKHYELPEKKRSDICTIMYTSGTTGDPKG
VLLTNESIIYLLEGVKKLLKTINEELTSKDVYLSYLPLAHIFDRVIEELFIYEAASIGFW
RGDVKILVEDIAALKPTIFCAVPRVLERIYNGLQQKLSDGGFLKKTLFNFAFNYKHNNMV
KGKAHEQAAPIFDKIVFKKVKEGLGGRVRLILSGAAPLAAHIESFLRVVACAHVLQGYGL
TESCGGTFVSIPNELQMLGTVGPPVPNVDIRLESVPEMGYDALASKPRGEICIRGKTLFS
GYYKREDLTQEVFIDGWLHTGDIGEWQPDGAMKIIDRKKNIFKLSQGEYVAVENLENIYS
HVAAIESIWVYGNSYESYLVAVVCPSKIQIEHWAKEHNVSGDFETICQNQKTKEFILGEF
NRVAKDKKLKGFELIKGVHLDTVPFDMERDLITPSYKKKRPQLLKYYQKEIDEMYNKTKN
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggatcggttcattgttgaggttgagaagggaaaagaaggcgtagatggagga
agtccgtcggtcggttcggtttaccggagtatctacgccaaagacggttttcctgaacct
gccgatgatctcctcagttgctgggatattttccgcttatctgcggagaaatctccagat
aatcctatgcttggtcgtagagaaattgttgatggaaaagcagggaaatatgtatggcaa
acttacaaagaagtatatgatatagtgatcaagcttggaaactctatccggactattgga
gttggaaaaggagagaaatgtggtatttatggcgccaatagtcctgaatggattataagc
atggaggcttgcaacgctcatggactctactgtgtacctctgtatgacactcttggtgct
ggagcaatagaattcatcatttgtcatgctgaggtttcacttgctttttctgaggagaaa
aagatttctgagttattgaagacagctccaaattcaacaaaatatttgaagaatattgtg
agctttggggaggtttcaaatgtgcaaagagcagaagctgagaggcacggattatcgata
tattcatgggaccaattcttgaagcttggtgagggtaaacattatgagttaccagagaag
aaaagaagcgacatttgcactataatgtatacaagtggcacaactggtgatcctaaagga
gtcttgctcacaaatgagagcattatttatctacttgaaggtgttaaaaagttgcttaaa
actatcaatgaagagttaaccagtaaagatgtttacctctcatatctacctctggctcat
atcttcgatcgcgtgattgaggagttatttatatatgaagccgcctccataggattttgg
agaggggatgttaagattttagttgaagacattgctgctttgaaaccgactattttctgc
gctgttcctcgcgtgctagagaggatatacaacggtcttcagcagaaactttctgatggt
ggtttcttaaagaagaccttatttaactttgccttcaactacaaacataataacatggtg
aaagggaaagctcatgaacaagcagctccaatctttgacaaaattgtatttaagaaggta
aaagaaggattaggaggaagagtgcgtctaatcctctcaggagcagctcctcttgcagct
cacatcgaatctttccttagagttgtcgcatgtgctcatgttctccaaggatacggtcta
acggagagttgtggtgggacatttgtatcgattccaaatgagcttcaaatgcttggaacg
gttggcccaccggttccaaacgttgacataaggctcgagtcagttccagagatgggttac
gacgctcttgctagcaagccacgtggagagatttgcataagaggaaagactttgttctct
ggatattacaaacgtgaagatctcactcaagaagtcttcattgatggatggcttcacact
ggtgatatcggtgaatggcaacctgatggagccatgaaaatcatcgacagaaagaagaac
atctttaaactctcacaaggagaatacgttgcggttgagaacttggaaaacatttacagc
cacgtagccgccattgaatcgatatgggtatatggaaacagctatgagtcttacttagtg
gcagtggtctgtccaagcaagatacagatcgaacattgggctaaagaacacaacgtttca
ggagattttgagactatctgtcaaaaccaaaagaccaaagagtttatccttggagagttc
aacagagtagccaaagacaaaaagctgaagggatttgagctgataaaaggtgttcacttg
gacacagttccattcgacatggaaagagatctcatcacaccttcttacaagaagaaaagg
cctcagcttctcaagtactatcagaaagagattgatgaaatgtataacaagacaaagaac
tga
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