Brassica napus (rape): 125578009
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Entry
125578009 CDS
T04128
Name
(RefSeq) piezo-type mechanosensitive ion channel homolog isoform X1
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
125578009
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bna04040
]
125578009
Membrane trafficking [BR:
bna04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
125578009
Ion channels [BR:
bna04040
]
Other channels
Mechanosensitive channel (Piezo)
125578009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_cap
Piezo_THU9_anchor
THU_Piezo1
Motif
Other DBs
NCBI-GeneID:
125578009
NCBI-ProteinID:
XP_048596213
LinkDB
All DBs
Position
A9:complement(62739..73920)
Genome browser
AA seq
2482 aa
AA seq
DB search
MASFLLGFFLPSLLLAASLINWSLISFFDLIAFLLLHYIAPEIGYRFQRRHWLLWPIFIF
SFAVLVAQALYLVLWATVGQHWDTSDSAWMSVIGFIILKSWRNPTVLYFLALQLLASLVA
LADIYSSRFGFVRWRWSRFSELFEHLGSHLRVASCLFLPAVQLALGICNPSWVSLPFFVG
SCAGLVDWSLTSNVSGLFRWWRVLYIYAGFNIVLLYLYQLPINFSDMIRWIASFIGLFRL
SAETEGTDICSGLFLLLFYIMLSYIRSDLEDMDFIMSPSENNLAERLLPAKYSFFIRESR
AGVRHTNVLLRGAVFKTFSINFFTYGFLVSLFALSFWSFHFASLCAFGLLAYVGYIIYAF
PSLFRLHRLNGLLLVFILLWAVSTYIFNVAFSFLNTKTGKDMKIWEMVGLWHYTIPGFFL
LAQFGLGMLVALGNLVNNSVFLYLSEESSRSSNDRSYAEADEETKVLVVATIAWGLRKCS
RAIMLALIFLIAMKPGFVHAVYVIFFLMYLLSHNINRKIRKSLILLCEVHFALLYILEID
LVSNSLKRQGSVSRDILFQLGLLRSESSWDFLEIALLACFCAIHNHGFEVLFSFSAIVRH
TPSPPIGFSILKAGLNKSVLLSVYSSPSSSYSQDNTTYERHIASFLSAIGQKFLSMYRSC
GTYIAFVTILISVYLVKPNYVSFGYIFLLLFWITGRQMFEETKRRLWFPLKAYAVLVFMF
IYCLSSFVSFQLWLSGFIDLYFYLGYNSEAPLLDNVWESLAVLIVMQLYSYERRQNGHYI
PGQSSLVHPGVFGFLERFLVWHGQKILFAALFYASLSPISVFGFVYLLGLVICTTFPKSS
SVPSKSFLIYTGFLVSAEYLFQLWGMQAQMFPGQKYAELSFYLGLRVYEPGFWGIESGLR
GKVLVVAACTLQYNVFRWLERTPGLTIIKGKYEEPCPLFVSAEGTTASVSSSNGENPSSI
DHASISIKQGEATSNSWPFFSPRDNQAAGFLHPKTEGSESGSSKKFSFGHFWGSIKESHK
WNKRRILALKKERFETQKNLLNIYLKFWIENMFNLYGLEINMIALLVASFALLNAISLVY
IALLAACVLLRRRLIQKLWPVVVFLFASILAIEYVATWNNLLPLDQDPSETSVHCHDCWS
IAAVYLKFCRDCWLGVRVDDPRTLISYFVVFMLACFKLRADQISSFSESSTYHQMKSQRK
NSFVWRDLSFETKSMWTVLDYLRLYCYVHLLDVVLILILITGTLEYDILHLGYLAFALVF
ARMRLEILKKKNKIFRFLRVYNFVLIIFSLAYQSPFVGNFNDGKCETVDYIYEVIGFYKY
DYGFRITARSALVEIIIFMLVSLQSYMFSSQEFDYVSRYLEAEQIGAIVREQEKKAARKT
EQLQQIREAEEKKRQRNLQVEKMKSEMLNLRVQLHRMNSDSNFGFASPRTEGLRRRRSSY
LIPDSGAASPEIDGVVHRKEGQPIDEDTQYPFEAHELPMSATPEAPDSPECSFGASPCEI
TEIQHNADVMSTEREIKEKSEGKDNALISAVQLIGDGVSQVQFIGNQAVNNLANFLNISP
ENSDINEQSSVDDEVYDEMESQNRIHKPFERSTSLQSDRSSDGASFQIGRILRHIWSRMQ
SNNDIVCYCCFIIAFLWNFSLLSMVYLAALFLYALCVHTGPTHIFWVVMLMYTEIYILLQ
YLYQIIIQHCGLSIDAPLLQELGFPTQRIKSSFVVSSLPLFLVYISTLIQSVITVKDGDW
VPSADFASRRNARGSQKDLTRINWSLRVWDVYKKLRDGVKLVIRSMYRYWISLTRGAESP
PYFVQVTMDVHMWPEDGIQPERVECRMNQLLRLVHNERCEKGNPDLCPYSSRVHVQSIER
STETPNEALVVLEVEYASPTNGCSTAEWYKSLTPASDVAKEIRKAQHSGLGEGTGFPYPI
LSVIGGGKRETDLYAYIFGADLMVFFLVAIFYQSVIKNKSEFIDVYQLVDQFPFDFVIIL
MVIFFLIVVDRVIYLCSFATGKVVYYLFSLILFTYAVTEYAWSIYPTQQHAAGLALRFIF
LAKAMSLALQAIQIRYGLPHKSTLYRQFLTSEVSRINYYGYRLYRALPFLYELRCVLDWS
CTATSLTMYDWLKLEDVNASLYLVKCDTVLNRATHKHGERQTKMTKCCNGICLFFILLCV
IWAPMLMYSSGNPTNIANPIKDASVQIDIKTAGGKLTLYQTTLCERISGDNIDLGLDLGS
QSFLPTYNKNDIQLICCQADASVLWLVPDTVVTRFIQSLDWDTDMDITFSWLLNRDRPKG
KETVKYERSVDPQDLPKRSDVQMVLNGSMDGFRVHNLYPKFFRVTGSGDVRSFEDQTDEV
SADILMNHADTKWWWSFHNLKASENISACEGMDGPVAIIMSEETPPQGFLGDTLSKFSIW
GLYITFVLAVGRFIRLQCSDLRMRIPYENLPSCDRLIAICEDLYAARAEGELGVEEVLYW
TLVKIYRSPHMLLEYTKLDYDA
NT seq
7449 nt
NT seq
+upstream
nt +downstream
nt
atggcgagttttctcctcggcttcttcttgccttcccttcttctcgcagcttcacttatt
aactggagtctcatatcattctttgatctgatagcttttctcctccttcactatattgca
cctgaaattggataccgttttcagaggagacattggctattatggcccattttcatcttt
tcctttgccgtacttgttgcacaagctctctaccttgtcctttgggctactgttggtcaa
cactgggatacatcagattctgcttggatgagtgttattggctttatcatactaaagtcc
tggagaaaccccactgttctgtatttcttggctttacaacttttagcatcgctagttgct
ttagctgacatatacagttctagattcggcttcgttcgatggcgatggtctcgcttttct
gaacttttcgagcatctaggaagtcatcttagggttgcctcctgcttgttcttaccagca
gttcaattggcactgggaatttgcaatccttcatgggtttctttgccatttttcgttggc
agctgtgctggtcttgtggactggtccttgacaagcaacgtttcaggacttttcaggtgg
tggagagttctttatatctacgcaggattcaacattgtcctactttacctctatcaacta
ccaataaacttctccgatatgattcgatggatagcaagctttataggtctattcagactc
tctgcggaaacagaaggcactgatatttgttctggtcttttccttttgcttttttacatc
atgctatcctatataaggtcagacctcgaggatatggattttatcatgtcgccgagtgaa
aataacttggcagagcgtcttcttcctgcaaaatattcgttttttattcgagaatcaagg
gccggtgttaggcacaccaatgttttactgaggggagctgtgtttaagaccttcagtatc
aatttcttcacatatggtttcctggtctctctgtttgctctttcgttctggagttttcat
tttgcgagcttgtgtgcttttggcctccttgcatatgttggttacattatctatgccttc
ccatcgttgttccgcttgcacagattaaacggccttctgcttgtatttatactcttatgg
gctgtcagtacgtacatattcaatgtagcattttcttttctgaacactaagactggaaag
gacatgaaaatttgggagatggtgggactttggcattacactatacctggattctttttg
cttgcacaatttggtttgggaatgttggttgcgttgggtaatcttgtgaacaactctgtt
tttctctacctgtctgaagagagctccagatcttccaatgacagatcttatgctgaagct
gatgaagaaacaaaggtgttggttgtcgcaaccattgcttggggattgcggaaatgttca
cgggctattatgctcgcactgattttcctcattgccatgaagcctgggtttgtccatgca
gtgtatgtgatattcttcctgatgtatctgctgagccacaacatcaacagaaagatacgc
aagtcactgattcttctatgcgaagttcattttgcacttctctacattcttgagatcgac
cttgtgtcgaactccttaaagcggcaaggctctgtgagcagagatattctgtttcagtta
ggtctccttaggtctgaaagctcttgggatttcttggagatagccttgcttgcttgcttc
tgtgctatccataatcatggttttgaggtgctattttccttctcagcaattgtacgacac
acaccaagccctccaattggatttagcatattgaaagctggtctcaacaaatcagttctc
ttgtccgtctactcatcgccatcttcaagttatagccaagataatactacttatgagaga
cacattgcttcatttctgagtgcgattgggcaaaagtttctgtctatgtaccgatcatgt
ggaacatacattgccttcgtcactattctcataagtgtatacctggtgaaacccaattat
gtatcgtttggatacattttccttctcttgttctggattactggaagacaaatgtttgag
gaaactaagagacgcttgtggttccctttgaaagcatatgcggttttagtgtttatgttt
atctactgcttaagtagctttgtcagcttccagctctggttatctggatttattgatcta
tacttttatttaggctacaactctgaagcaccattgctggataacgtatgggaatctctt
gctgtgttgatcgtgatgcaactttacagctatgaaaggaggcagaatggacattacatt
ccaggtcaatctagtttggttcatcctggagtttttggttttcttgagaggtttttggta
tggcatggtcagaagatcttgttcgcggcattgttttatgcatcattgtctccaatcagt
gtgtttggatttgtatatctcctcggccttgtcatctgcacaaccttcccaaagtcttct
tcagtaccatccaaatcatttttgatctatactggatttctcgtgtctgctgagtatctt
ttccaactgtggggcatgcaagctcagatgttccctgggcaaaaatatgcggagttgtct
ttctacttgggccttcgagtatatgaacctggattttggggtatagaatcaggtctacga
ggcaaagtgctggttgtcgctgcctgtactctgcagtacaatgtatttcgttggctagaa
aggacacctggtttaactattatcaaaggaaaatatgaagagccttgtcccctatttgtc
tctgcagaaggcacaactgcaagtgtttccagttctaatggtgaaaacccatcttccata
gatcatgcttctatatcaattaaacaaggcgaggctactagtaactcatggcctttcttc
tctccccgtgataatcaggcagctggtttcttgcatcccaagactgaaggctctgaaagt
ggcagtagtaagaaattttcatttggtcatttctggggaagcatcaaagagagtcacaag
tggaacaagaggcggattctggcattgaagaaggagaggtttgagacgcagaagaatctg
ttaaatatttacttgaagttttggattgagaacatgtttaacctctatggccttgagata
aacatgatagcgctgcttgttgcaagttttgctttgctgaatgccatctccttggtatat
attgcgctgcttgctgcgtgtgtcctcttgagaagacgcctaattcagaaactatggcct
gtcgttgtttttctgtttgcatcaattctcgcaattgaatacgttgccacgtggaataac
ttattgcctttagatcaggatccaagtgaaactagcgtgcattgccatgattgctggagt
attgcagctgtctacttaaaattttgccgggactgctggctgggagtgagagttgacgat
ccccggacccttattagctatttcgtggtgttcatgcttgcctgttttaaacttcgggct
gatcagatatctagtttctcagagtcatcgacatatcatcagatgaagtctcagagaaag
aactcatttgtctggagagatctctccttcgaaacaaagagcatgtggaccgtgcttgat
tacctgaggctttattgttacgtccatctgttggatgttgtgcttattctgattctaatc
acaggaactctcgagtatgacattctacacctgggctatcttgcattcgcacttgttttt
gcccggatgcgacttgaaatactgaagaagaagaacaaaatattcaggttcttgcgggtg
tacaattttgttctcatcatcttttctctcgcatatcagtctccatttgttggaaacttc
aatgatggaaagtgtgaaacggttgattatatttacgaggtgattggattttacaagtat
gactacgggtttcgaatcactgcaagatctgctctcgttgagatcatcatatttatgtta
gtatctcttcagtcctacatgttttcctcccaggagtttgattatgtctcgcggtatctt
gaagcggagcaaattggtgctattgtgcgggagcaagagaagaaagctgcacgaaagacc
gagcaactgcaacagattcgtgaggctgaagaaaagaaacggcagcggaatttgcaggtg
gaaaagatgaagtcagaaatgctgaacctgcgggtacagcttcacagaatgaattctgat
tctaattttgggtttgcttctccgcgcactgaaggtctacgaaggaggaggagttcgtat
ctaattccagatagtggtgcagccagtccggagattgacggagtggtccacaggaaagaa
ggccagcctattgacgaggatacacagtatccttttgaagctcatgagcttcctatgagt
gccacgccagaagcaccagattctccagagtgttcatttggagcatctccttgtgagatc
actgaaattcaacacaatgctgatgtcatgtctacggagcgtgaaataaaagaaaagtca
gaaggaaaagataatgccttgatttctgctgtgcaactcatcggtgatggcgtttcccag
gtgcaatttattggaaatcaggcagtaaataaccttgcgaatttcttaaacatctcacca
gaaaattcagatataaatgagcagtcctctgttgatgatgaggtgtatgatgagatggaa
agccagaatagaatacacaaaccttttgaacggtcaacatctctacaatcagacaggagt
agtgatggcgctagctttcagataggaaggatccttcgtcatatatggtctaggatgcag
tccaacaatgacattgtttgctattgctgcttcattattgcgtttctgtggaacttcagt
cttctttccatggtctatctagcagcgctgttcctatacgccctctgcgttcacactgga
cctactcacatcttctgggtcgtcatgctaatgtacacagaaatctatatcctcctccag
tacttataccagattataatccagcactgtgggttgagtattgacgcaccacttcttcaa
gaactgggatttccaacgcaaagaatcaaatcatcgtttgttgtcagctcgttgcctctc
ttccttgtttatatatccactctcatacagagtgttataacagtgaaagatggtgactgg
gttccttctgctgatttcgcttctcgccggaatgcccgtgggagccagaaggaccttaca
agaattaactggagcctgagagtttgggatgtgtacaagaagctgagagatggtgtgaaa
ttggtgatcagaagcatgtatcggtactggatctctctgacacgtggagcagaatcccct
ccttactttgttcaggtgacaatggatgttcacatgtggcctgaagatggaattcaacct
gaaagagttgaatgcagaatgaatcagttgcttaggcttgtccataatgagagatgcgag
aagggaaaccctgatctttgtccttactctagcagggtccacgtacaaagtatagagaga
agtacagagaccccaaacgaggccttggttgtgctcgaggttgagtacgcgtctcccacg
aatgggtgttctacagcagaatggtacaaatcactaacaccagcctcggatgtggcgaaa
gagattcgtaaagctcaacatagtggacttggtgaaggaactgggtttccgtaccccatt
ctctctgtgattggcggaggaaagagagaaacagacctctatgcctacatatttggtgct
gatttgatggtcttctttctggttgccattttctaccaatccgtcatcaaaaataaaagc
gagtttatcgatgtatatcagctagtggaccagttcccatttgactttgtcattattcta
atggttatcttcttcctgattgttgttgatcgggtcatctatctttgctcctttgcgact
ggaaaagtggtgtactacctcttcagtcttattctcttcacatatgcagtgacagagtat
gcttggagcatatatcctacgcagcagcatgctgctggcttggctctcagattcatattt
cttgccaaagcaatgtcactagctctccaggccatacaaatccgctatgggctacctcat
aagagcaccttatatcggcagtttttgacaagtgaagtttcacggatcaattactatggc
tacagactttaccgtgctcttccttttctgtatgaattgagatgtgtacttgactggtcc
tgcacagcgacatcactgactatgtatgactggctcaagttggaagatgtaaatgcgagt
ctgtaccttgtcaaatgcgatacagttttaaatcgtgctacacacaaacatggagagagg
caaacaaaaatgactaaatgctgcaacgggatatgtctgttcttcatcttgttatgcgtt
atctgggctcctatgctgatgtatagcagtggtaacccaacaaacatcgcaaatccgata
aaagatgcgagcgttcagattgatataaaaacagctggtggaaagcttactttgtaccaa
acaaccctgtgcgagagaatttcaggggataacattgatctcgggctagatctcgggtcc
caaagcttcttgccaacgtacaacaaaaatgacatccagctgatatgctgccaagctgat
gcaagcgttttgtggcttgtccctgacacagttgtgaccagattcattcagtccctcgac
tgggacacagatatggacatcaccttttcttggcttcttaacagagaccgacctaaaggt
aaggagactgtcaagtacgaaagaagtgtggaccctcaggaccttccaaaacgctctgat
gtgcaaatggttctcaacggctcaatggatggatttagagtgcataacttgtacccaaag
tttttccgtgttactggttctggtgatgtcaggtcttttgaagaccagacggatgaagtg
agtgcagacatactcatgaaccatgcagataccaagtggtggtggtcattccataatctt
aaggcgtctgaaaatattagcgcttgcgagggtatggatggaccagttgctatcataatg
tctgaggaaactcccccacaggggtttctgggtgacacgctcagcaaattcagtatatgg
ggactctatataacatttgtactagcagtcgggcgtttcatcaggcttcaatgctctgac
ctgcgtatgagaataccatacgagaacctcccttcgtgtgacagattaatagcaatatgt
gaagacttatacgcggcgagagcagagggtgagcttggagtagaagaagttctatactgg
acccttgtgaagatctatagatctccacacatgctgcttgagtatacaaagctagactac
gatgcttag
DBGET
integrated database retrieval system
