Brassica napus (rape): 125578639
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Entry
125578639 CDS
T04128
Name
(RefSeq) probable galacturonosyltransferase 6 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
bna
Brassica napus (rape)
Pathway
bna00520
Amino sugar and nucleotide sugar metabolism
bna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
125578639
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
bna01003
]
125578639
Enzymes [BR:
bna01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
125578639
Glycosyltransferases [BR:
bna01003
]
Polysaccharide
Structural polysaccharide
125578639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
125578639
NCBI-ProteinID:
XP_048597888
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Position
A9:complement(43697711..43700993)
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AA seq
599 aa
AA seq
DB search
MKQSRRWQRTLLLSLLSISFFAPLILLSNRLQSITPVGRRESIEDLSNFRYKTNDLRLNA
IEHEGGVGLKGPRHILLKDGDFNESGAVIQSNEDEKTVDFPKTDGNDFKFREESQRRTES
SDGKDQLLTVIQLANKTDYKPPLSKVEKSTKAQRDGAIDVKIKEIRDKVIQAKAYLNFAP
PGSNSQSVKELRTRMRDLERAVGDVTKDKDLSKGALRRLKPMEAALYKASRIFTSCPAMA
TKLRAMNYNTEELAQAQKNQATYLMHLAARTTPKGQHCLSMRLTSEYFALDPEKRQMPNQ
ENYNDPSLSHYVVFSDNVLASAVVVNSTISSSKDPEKIVFHVVTDSLNYPSISMWFLLNI
PSKATIQIQNIDDMDVLPSDFDQLLMKQNSNDPRFISTLNHARFYLPDIFPGLNKVVLFD
HDVVVQRDLSRLWSIDMKGKVIGAVETCQEGEEASLHSMSTFINFSDAWVAGKFSPKACT
WAFGMNLVDLEEWRRRKLTSTYVKYFNLGTKRPLWKAGSLPIGWLTFYRQTLPLDKRWHV
MGLGRESDIKTVDIEQAAVIHYDGIMKPWLDIGIEKYKRYWNRHVPYYHSYLQQCNIQA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaagtcgtcgatggcagaggactctcctcctctccctgctatcgatctctttc
ttcgccccgcttatcctcctctcgaatcggcttcagagcatcactcccgttggtcggaga
gaatcgatcgaagatttatccaactttagatacaagacaaatgaccttagacttaatgct
atcgaacatgaaggtggagtaggcttgaaggggccaaggcacattctcctcaaggatggg
gattttaatgaaagtggtgctgttattcagtccaacgaggatgagaaaacagttgatttc
ccaaaaactgatggaaatgattttaaattcagggaagagtcacaacggaggacagaaagc
tctgatgggaaggatcagttgctaacagttattcaacttgctaataaaacggattacaaa
ccccctttatccaaggttgaaaagagcacaaaggctcagcgtgatggagcaatagatgtg
aagataaaggagatcagagacaaagttatacaagctaaggcctacctgaattttgcccca
cctggaagcaattctcagagtgtgaaggagttgagaactcgaatgagagatctggaacgt
gctgttggtgacgtgacaaaggataaagatttgtcgaagggcgctcttcgcaggttgaag
cccatggaagctgcactatacaaggctagtcgtatcttcaccagttgccctgccatggct
accaaactccgtgccatgaattacaatacagaagagctagctcaggcgcagaaaaaccaa
gcaacatatctaatgcaccttgctgcaaggaccaccccaaaagggcaacactgtctctcc
atgcgtttgacatcagagtactttgccctggatcctgaaaaaagacagatgcctaaccag
gaaaattacaatgatcctagtctcagtcattatgttgtcttctctgacaatgttttggct
tctgcagtcgttgttaactctacaatatcttcttcaaaggatccggaaaaaattgtattc
cacgtggtgactgattcacttaactacccatcaatctccatgtggtttttgctaaacatt
ccaagtaaagctaccatccaaatccaaaacattgatgatatggatgtcctgccttcagat
tttgaccagttgctgatgaagcaaaactccaatgacccaagattcatttctactctcaac
cacgcacgcttctatctcccggatatattcccgggtttgaacaaggtggtactctttgac
catgatgtagtagttcagcgagatttaagtagactctggagcattgatatgaaagggaag
gtgattggtgctgtagagacttgtcaagaaggtgaagaagcttcactccattcaatgagc
acatttattaatttctcagacgcatgggtcgctgggaaattcagtcctaaagcgtgcacg
tgggcgtttgggatgaatctagttgatctcgaagaatggagaagacggaagttgacttct
acatacgtaaaatacttcaacctgggaacaaagagaccgttgtggaaagctggaagctta
ccaatagggtggttgactttctataggcaaacattaccgttggacaagagatggcatgtg
atggggttaggtcgagaatcagacatcaaaacggtcgacatcgaacaagcggcggtaata
cactacgatgggatcatgaagccgtggttggatattggaatagagaaatacaaacgttac
tggaacagacatgtcccttactatcactcctacttgcaacagtgcaatattcaagcttga
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