Brassica napus (rape): 125578640
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Entry
125578640 CDS
T04128
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
bna
Brassica napus (rape)
Pathway
bna00906
Carotenoid biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
Module
bna_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
125578640
Enzymes [BR:
bna01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
125578640
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Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
Thi4
FAD_oxidored
HI0933_like
GIDA
GDI
Pyr_redox_2
DUF7557
Motif
Other DBs
NCBI-GeneID:
125578640
NCBI-ProteinID:
XP_048597890
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Position
A9:43692843..43696283
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AA seq
587 aa
AA seq
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MNLCLHNPVTCADRSSSLFSALKTSNYKLGTSKFGFLKHRKKNHVVAVRSVSTSTVTTVK
EETKRESQVYDAIVIGSGIGGLVAATQLAVKEAKVLVLEKYLIPGGSSGYYERDGYTFDV
GSSVMFGFSDKGKLNLITQALKAVGREMEVIPDPTTVHFHLPNDLSVQVHREYDEFVNEL
ISKFPHEKEGVLGFYGVCWKIFNSLNSLELKSLEEPIYLFGQFFQKPLECLTLAYYLPQN
AGDIARKYIKDPQLLSFIDAECFIVSTVNALQTPMINASMVLCDRHYGGINYPVGGVGGI
ARSLAGGLVDQGSEIFYKANVKSIILDDGKAVGVRLADGREFFAKTIISNATRWDTFGKL
LKGEKLPKEEENFQKVYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLEDDWKNLEEPYGSI
FLSIPTILDPSLAPDGRHILHIFTTSSIEDWEGLTPKEYEAKKEEVAAGIIQRLEKKLFP
GLSSSITFKEVGTPRTHRRYLARDKGTYGPMPRGTPKGLLGMPFNTTAIDGLYCVGDSCF
PGQGVIAVAFSGVMCAHRVAADIGLERKSKVLDAGLLGLLGWLRTLA
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaatctctgtctccacaatcccgtaacgtgtgctgatcgcagctcctctttgttctcc
gccttgaagacttcaaattacaaactgggtacttcaaagtttgggtttttaaagcatcgg
aagaagaatcatgtggttgctgtgaggtctgtttctacgagtacggtcactaccgttaaa
gaagagacgaagagagagagtcaagtgtacgacgccatcgtcatcgggtctgggattgga
ggattagttgcggcgactcagctagcagttaaagaagctaaagttctagttttggagaag
tatctcatccctggtgggagctccggttattacgaaagagatggatacacattcgatgtg
ggttcctctgtcatgtttggtttcagcgataaggggaaactaaacttgataactcaggcg
ttgaaggcagttggtcgtgagatggaggttatacctgatcccaccactgtccatttccat
cttcccaatgatctctctgttcaggttcatagagagtatgatgagttcgttaatgagctt
attagcaagtttccgcacgagaaggaaggggttcttgggttctatggcgtctgctggaag
atcttcaactcattgaactctttggaactgaagtcacttgaagagcctatctaccttttt
ggacagttctttcagaagccccttgaatgcttgacactcgcttattacttgcctcaaaat
gctggggatatagctcggaagtacataaaagatccgcaattgctgtctttcattgacgca
gagtgtttcattgtgagcacagtgaatgctttgcagacgccgatgatcaatgcaagtatg
gttttatgtgacaggcactatggagggattaactaccctgttggtggtgttggtgggatt
gcaaggtctttagcaggaggactagttgatcaaggaagtgaaatattctacaaagctaat
gtgaaaagcataattcttgatgatggaaaggctgtgggtgtaaggctagcagatggaaga
gagttcttcgctaaaacaataatttctaatgctacaagatgggatacgtttgggaagctg
ttgaaaggagaaaagcttccaaaagaagaagaaaacttccagaaagtctatgtgaaggct
ccatcgtttctctcaatccacatgggtgttaaagcagaggttctccctccagatacagat
tgccatcatttcgtacttgaggatgattggaagaatctggaggagccttatggcagtatc
ttcctcagcattccaaccattcttgatccatctttggctccagatggtcgacatatactc
cacatatttacaacttcttccatcgaagattgggagggactcactcctaaagagtacgag
gctaaaaaagaagaggtggcagctggaatcatacagaggctagagaaaaaactgtttcct
ggtctcagttcatctattacttttaaggaggtgggcacaccaagaacacacaggcgatat
cttgctagggataagggaacgtatggaccaatgccaagaggaacaccaaaaggtttacta
ggcatgccgtttaacacaactgctatagatggtttgtactgcgttggggatagttgtttt
cctggtcagggagttatagctgtggctttctcaggagtgatgtgtgctcatcgtgtagct
gctgacattgggcttgagagaaaatcaaaggtacttgatgctggtcttcttggtttactt
ggttggttaaggacactcgcatag
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