Brassica napus (rape): 125579043
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Entry
125579043 CDS
T04128
Name
(RefSeq) elongator complex protein 1-like isoform X1
KO
K11373
elongator complex protein 1
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
125579043
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
125579043
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
125579043
NCBI-ProteinID:
XP_048598294
LinkDB
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Position
A10:16015930..16020703
Genome browser
AA seq
1321 aa
AA seq
DB search
MKNLKLFSEVSQNIQLHSTEDEAVQFAAYDIDQSRLFFASSTNFVYALHLSSFHNGRDSA
KGLPVEVCSIDLEAGDFITAFDYLAEKESLLIGTSRGLLLVHVVESNVTELVGNIEGGVR
CLSPSPTGDLLGLISGFGQLLVMTYDWDLMYERELSEAPEGGYVREADDVSVNCEGPSIS
WRGDGKYFATMGEVFESGSMHKKIKIWENDSGALQSSSEAKDFMKGILEWMPSGAKIAAV
YKKKSDDGCPSIAFFERNGLERSSFSIGEPGDANVAFESLKWNSASDLLAGVVSCKTHDA
VRVWYFSNNHWYLKQEIRYPREAGVMVMWDPTKPTQLICWTLAGQVTVCNFMWVTAVMED
STAFVVDNNKILVTPLSLSLMPPPMYLFSLSFSSAVKDIAYYSRNSKSCLAVFLSDGNLS
FVEFPARDTWEDLEGRDFNAEISECKTALGYVTHLLWLDVHSLLCVSAYGSSQNKCLSSG
SSETELHGSYLQEVEVVCHEDHVPDQVTSSGFGASVTSQTPLESPVMALAWNPSKRDSAF
VEFEGGKVLSYASRSGFMETRINDNSISFPSACPWVKVAQVDAGGLQKPLVCGLDDMGRL
YINGKSLCNNCSSFSFYSELDNEVVTHLIILTKQDFLFIIDTEDVLQGGEVALGNVYFVI
DGRKRDEEVMSYVNVWEKGAKVIGVLNGDEAAVILKTIRGNLECIYPRKLVLSSITNALA
QQRFKDALNLVRRHRIDFNVIVDLYGWQAFLQSAVEFVEQVNNLNHVTEFVCAMKNEDVT
ETLYKTFSFSKKRDKVLQAKDLSGNKVSSVLQAIRKALEEHIPESPSRELCILTTLARSD
PPAIEESLMRIKSVREMELQNSSSDDNSSKKSRPSAEEALKHLLWLLDSEAVFEAALGLY
DLNLAAIVALNSQRDPKEFLPYLQELERMSEPLMHFNIDLKLQRFDSALKSIVSAGDEYF
PDCMDLIKKNPQLFPLGLQLITDSEKKQAVLEAWGDHLTDEKRFEDAATTYLCCFNLEKA
SKAYRECGDWSGVLRVGALMKLGKDEILKLAYELCEEVNALGKPGEAAKIALEYCGDISG
GVNLLINAREWEEALRVAFMHTEDGLVSVVKSSALECANGLVSEFKESIEKVGKYLTRYL
AVRQRRLLLAAKLKSEERSVIDLDDDTASEASSNLSGMSAYTLGTRRGSAASVTSSTATK
ARDLRRQRKSGKIRAGSAGEEMALVDHLKGMRMTEGGKRELKSLLICLVTLGEKESAQKL
QQTAENFQVAQVAAVELADDTVSSESVDEEVYSFERYALKTRSTARGSDAFSWMLKVFVS
P
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacttgaagcttttctcggaggtttctcagaacatccaattgcattcgactgaa
gacgaagctgtacagttcgcagcttacgacatcgaccagagtcgcttgttcttcgcatct
tctactaacttcgtttacgcccttcacctctcttccttccacaatgggagagatagtgcg
aagggtttgcctgtggaggtctgcagtattgatttggaggcaggggatttcatcactgcc
tttgattatctcgcggagaaggagtctttattaatcgggacttctcgtggccttctactt
gtgcacgtggtggagagcaatgtgactgagctagttggaaatatagaaggaggtgtcagg
tgtctctcgcctagtcctactggagatctgcttggattgattagcggttttggtcagttg
cttgtaatgacttatgattgggatttgatgtatgagagggagctttctgaggctcctgaa
ggtggttacgtacgtgaagcagatgatgtgtctgtaaactgtgagggaccttccatttcc
tggagaggcgatgggaagtattttgccactatgggtgaggtttttgaatccggctctatg
cataagaagattaagatatgggagaatgattctggcgctttgcagtcttcttcagaagca
aaagatttcatgaaggggattcttgaatggatgcctagtggggcaaaaatcgcagctgtt
tataaaaagaagtcagatgatggatgcccgtcgattgctttcttcgagaggaacggactt
gagaggagctcatttagcatcggagagcctggagatgccaacgtagcatttgaatctctg
aagtggaactctgcatcagatcttcttgcaggggttgttagttgcaaaacacacgatgct
gttagggtgtggtactttagcaacaaccactggtacctgaaacaggagattaggtatcca
agggaagctggagtaatggtcatgtgggatccaacaaagccaacgcagttgatatgttgg
actctggcagggcaagttaccgtttgtaattttatgtgggtaacggcagtcatggaggac
tcaacagcctttgtcgtagataataacaagattctcgtgacgccactgtctttgtccttg
atgccgcctcctatgtatttgttcagccttagcttctcttccgctgtaaaggacatagca
tattactcaaggaactctaaaagttgtctggctgtgttcttgtctgatggaaacctgtct
tttgttgagtttcctgcacgtgatacttgggaagatcttgaaggtagagacttcaatgca
gaaatttcggagtgtaaaacagcgttgggctatgttacacatcttctatggctcgatgtc
cattcgcttctgtgcgtctctgcttatggctctagccagaacaagtgtctctcttctggt
tcgtctgagacagagcttcacggttcttatttacaggaagttgaagtcgtctgtcacgag
gatcatgttcctgatcaagtaacatcctctggctttggtgctagcgttacttcccagaca
cctctcgagtcacctgtcatggctcttgcctggaaccctagcaagcgtgattcagccttt
gtagagtttgagggtgggaaagtgcttagctatgcatcaagatcaggctttatggaaact
cgtatcaatgataatagtatctcttttccatcagcttgtccttgggtgaaggtagcgcag
gttgatgctggtggcctgcagaagcccttggtatgtgggctagatgatatgggcagactg
tacatcaacgggaagagcctatgtaacaactgcagcagcttctcgttttactcagagctg
gacaatgaagtggttacccatctgatcatcttgaccaaacaggattttctctttatcatc
gacaccgaggatgtactgcagggaggagaagtggcacttggaaacgtctactttgtcatt
gacggtagaaagcgagatgaggaagttatgagctacgtaaacgtttgggagaaaggtgcc
aaagtaataggagtcctcaacggagacgaagctgctgtaatattaaaaactatccggggc
aatctcgaatgcatttatcctagaaagctagtcctgtcttcaatcacgaatgcgttagct
cagcaacggtttaaagatgcattaaacttggttaggcgacacagaatcgactttaatgtt
atcgtggacctatacgggtggcaggcgtttctacaatcagctgtagagtttgttgaacaa
gtaaacaatctgaaccacgttacggagttcgtttgcgctatgaagaatgaagatgttaca
gaaacactttacaagacgttctccttctccaaaaagagggacaaggttttacaagcgaag
gatctatccggtaacaaagtatcatcagttctacaagcaattagaaaagcccttgaagag
catataccagagagtccctcaagggagctttgtatcttgaccactctcgcccgaagtgat
ccaccggctattgaggagtctctcatgaggataaaatctgttcgtgagatggagttgcaa
aactcctcttctgatgataactcaagtaaaaagtctcgtccatctgcagaagaagcattg
aaacaccttctgtggttattagactcagaggctgtcttcgaagctgctttaggtctttac
gatctgaaccttgcagctatcgtggcgctcaactcccaacgcgatccgaaagagtttcta
ccttatctccaggagctggagagaatgtccgaacctctgatgcatttcaacatcgacctt
aaactgcagcgtttcgatagcgctctcaagagcatcgtatcagcaggggatgagtacttt
cctgattgcatggacttgatcaagaagaaccctcagcttttcccgcttggccttcagctg
attaccgattctgaaaagaaacaagcggttctagaggcttggggagatcatctcactgat
gagaaacgtttcgaggatgctgctactacgtacctatgctgctttaaccttgaaaaggct
tcaaaggcgtatcgtgagtgtggtgattggagtggagtactcagagtaggcgcgctaatg
aagttagggaaagatgagatcctgaaattagcgtacgagttatgtgaagaggtcaatgca
cttgggaagcctggggaagcagcgaagatagctttagagtattgcggagatataagcggt
ggagttaatttgcttatcaatgcgagggagtgggaagaagctttaagggttgcctttatg
catacagaagatggtttagtctcagtggtgaagagctctgctcttgagtgtgctaatggt
ctagtaagcgaattcaaagaatcgatagagaaagtaggaaagtatttgactcggtatcta
gctgttcgtcagagacggttgctgcttgcagcaaagctcaagtctgaggaacggtcagtc
attgatcttgatgatgacacagcttcagaagcaagtagcaacctgagtggcatgagcgcc
tatactttagggacaaggagaggttctgctgcttcagtcacctcaagcacggcgactaag
gcaagagacttgaggcggcagagaaagagcgggaagatccgagctggcagtgcgggtgag
gagatggctcttgttgatcatttgaaaggtatgcgcatgacagaaggaggaaagagagag
ctgaagtctttattgatatgtttggtaacacttggtgagaaggagtctgcacagaagttg
caacagactgcagagaatttccaggtcgctcaggtagcagcagttgagctagcagacgat
acagtctccagcgagagcgttgatgaagaagtgtattcctttgaacgttacgctctgaag
acgaggtccacggcacgaggatctgatgcctttagctggatgcttaaggtgttcgttagc
ccatga
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