Brassica napus (rape): 125580629
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Entry
125580629 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase ATL42-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
125580629
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125580629
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
125580629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_16
zf-HC5HC2H
FANCL_C
Tmpp129
zf-HC5HC2H_2
zf-Nse
Sas6_CC
Adeno_E3_CR2
Prok-RING_4
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
125580629
NCBI-ProteinID:
XP_048601374
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All DBs
Position
C1:6084010..6085588
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AA seq
417 aa
AA seq
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MYQIFIFFVTIFHSYYYVSAQPPAPPFRNGDLVTNFEPSLAVVTGVLAIMFTLTFVLLVY
AKCCHIDLRSGTGDGRRQDRRLRQGIFFNRSTNSSDRFSGLDKTAIESLPLFRFSALKGS
KQGLECSVCLSKFESVEILRLLPKCRHAFHVGCIDQWLEQHATCPLCRARVSVEDESSVH
GNSFRFLNQSEVREDSSLELYIEREEEEEERRQREELGGSSRFSIGGSFRKILKLGHKDK
PLLDQHGEDKVMHKFNHRILVSDVVFKNRWSNVSSSDLMFLNSEMVSSISSERFSSMDRV
KRGDEEDRRGNLQVKEDNRMLENKLSENRDLGSKSRNVMIEPGRRSISDITAVPRLSIVV
HGDCSGSNAASALENGGNETEERRRRLWLPIARKTAQWFANREKRHQINTTHQHFDV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaaatcttcatcttctttgtaacaatcttccacagttattactatgtatctgct
cagcctcctgctcctccgttcagaaacggcgacctagtcacaaacttcgagccgagttta
gccgtcgtcaccggcgttctcgccatcatgttcacactcactttcgtcctcctcgtctac
gctaagtgctgccacatcgatctccggtcaggtaccggcgacggaagacggcaagatcgc
cggctccgacaaggaatattctttaaccggtctaccaactcctcggaccgattctccggt
ttagacaaaaccgcgatagagtcacttcctctgtttagattctctgctttgaaaggatca
aaacaagggcttgagtgttctgtctgtctatctaaattcgaaagcgtcgagattcttaga
ttgttgcctaaatgtcgtcacgctttccacgtgggatgcatcgatcagtggcttgagcag
cacgcaacttgtcctctctgcagagcgagagtctcagtggaagatgagtcctctgtccat
ggaaacagcttccggttcttgaatcagtctgaggtacgggaagactcgagcttggagctt
tacatcgagagagaagaagaagaagaagagaggagacagagagaggaacttggtgggtcg
tcgaggttcagcatcggagggagtttcaggaagattcttaaattaggtcataaagataaa
ccgttacttgatcaacacggagaagataaggtgatgcataagttcaatcataggatcctt
gtgtctgatgttgtgttcaagaatcgttggagcaacgtgagctcatctgatttgatgttt
ttgaattcggagatggttagttcgatttccagtgagagattctcgtcgatggatagagtg
aagagaggtgatgaagaggatcgaagaggtaacttgcaagtcaaggaagataatagaatg
ttggagaacaagttgtcggaaaacagagatcttggttctaaatcaagaaacgttatgatc
gagccgggaagaagatcgatttctgacatcactgcggttcctagactgagtattgtggtc
catggagattgtagcggttcaaacgcagcgtctgcgttagaaaacggtggaaacgagacg
gaggagagaagacggcgtttgtggctgcccatcgctagaaaaaccgctcagtggtttgcc
aatagagaaaaaagacatcaaattaacacaacacaccaacactttgatgtttag
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