Brassica napus (rape): 125580871
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Entry
125580871 CDS
T04128
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bna01009
]
125580871
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
125580871
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
125580871
Protein phosphatases and associated proteins [BR:
bna01009
]
HAD phosphatases
Fcp/Scp phosphatases
125580871
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
125580871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Spore_YunB
Motif
Other DBs
NCBI-GeneID:
125580871
NCBI-ProteinID:
XP_048602078
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Position
A2:27317770..27322039
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AA seq
861 aa
AA seq
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MFSRFRFFPISSVSSNMSTDHQAIAINDAVHKIQLALLNGITSQTHLFSARALMSQSDYE
DVVTERTIAKLCGYPLCRSPLPSDVVSRRGKYRVSLKEHRVYDVRESRKFCSGECLVSSR
AFGKSLQEVRTSEFDMVKLGGIVGLFGDGDVVEEEEGLGLGLGKLSICEKSDVMRGGEVD
LEEWMGPSSAVEGYVPFDRSNVKSRDGSKESKAKNKQKKQEDPSFNETGFTSTVIVPDEC
SVPSNYNSKQDAKATKNKHKKQEEPPFNEMGFTSTVIVPDECSVSNYNSKQDSKAKNNKQ
KKQEGPPFNEMGFTSEVIVPDECSVSKVPPQTKQTSPVVKPVDDQGKTPKKSRFRREKEK
EKEKIDFASFGFDAMGCASPVTGNDGYSVEYSVSKQPPSSTEDPLGGQMKDSLKTLDEKR
SSSASKGKGFKPPPRRKQASHAGESSKGKTVVTITEKDIQSSLVDEMGVMSDGFSVEYNV
SKQPPSSMEVPLSSHLEGSQTLDKKNALLGSSSGSNTKALGKKVISDSCEGLEAHQDMCS
SSEAVTKSCLKGSGSKKLSHSVTWADQSDGRGDLCEVRSDDIDSGLNTEDVSRLALAEAC
AKALSQAAEAVSSGDLDASDAAAKAGIVLLPSTHQLDEEVSEEETEEEMSEEEEEATLLK
WPNKPGTPDSDLFDRDQSWFDETPEGFNLTLSPFAMMWDSLFGWVSSSSLAYIYGKDESA
HEEFLSVNGKEYPRRIRLGEGLSSEIKETIAGCLARAVSRVATVLKLPVPISELEKGLGS
LLETMSLTGAVPSFRIEQWLVVVLLFLDALSVCRIPRIAPYLLNRNKVLEGSGIGNEEYE
TMKEILLPLGRVPQFATLCGA
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtcgtttcagatttttcccaatctcctccgtcagttcgaacatgtcgacggat
catcaagcaatcgcaatcaacgatgcggttcacaagatccagctcgctctcctcaacggc
atcacttcacaaacccacctcttctcggcaagggccttgatgtcccaatcggactacgaa
gacgtcgtcacggagcgaaccatcgccaagctctgcggctaccctctctgcagatccccc
ctcccttccgacgtcgtttccaggagagggaagtaccgcgtctccctgaaggagcacagg
gtctacgatgttcgggagagtaggaagttctgctcgggggagtgtcttgtgagcagcaga
gcgtttgggaagagtctgcaggaggttcgtacctcggagtttgatatggtgaagcttggt
gggattgttggtttgtttggtgatggggatgtggtggaagaggaggagggtttggggttg
gggttggggaagttgagtatttgtgagaagagtgatgtgatgagaggtggggaggtggat
ttggaggagtggatgggtccttctagtgctgttgaaggttatgttccttttgatagaagc
aatgtcaaatctagagatggcagtaaggagtccaaggctaagaataaacaaaagaagcag
gaggatccgtcttttaacgagacgggttttactagcacggttattgttcctgatgagtgt
agtgttcctagcaattacaactctaaacaagatgctaaggctactaagaataaacacaag
aagcaggaggagccgccttttaacgagatgggttttactagcacagttattgttcctgat
gagtgtagtgtaagcaattacaactccaaacaggattccaaggctaagaataataaacaa
aagaagcaggagggtccgccttttaacgagatgggtttcactagcgaagttatcgttcct
gatgagtgtagtgtttcaaaggttccaccacagaccaaacaaacttctcctgtagtgaaa
cctgtggatgatcaagggaaaacaccaaaaaaatcgaggtttcgtcgtgaaaaggaaaag
gaaaaggaaaagatcgattttgcgagctttgggtttgatgcaatgggctgtgcgagccct
gtcaccgggaatgatggatacagcgttgaatacagcgtgtctaagcagccaccatcttca
acggaagaccctcttggtggccaaatgaaagatagtctcaagactctggatgagaaaaga
tcctcttctgcgtctaaagggaaggggtttaagcctccaccacggcgcaaacaagcttct
catgcaggcgaatcaagcaaagggaaaacagttgtgacaatcacggagaaggacattcaa
agttctctggttgatgagatgggtgtaatgagcgatggattcagtgtggaatataatgtg
tctaagcagccaccatcttcaatggaagttcctctaagttctcacctagaaggttctcag
acactagacaagaaaaatgctctactaggatcatcttctggttctaatacaaaagccttg
ggaaagaaagttatttctgattcttgtgagggacttgaagctcatcaggatatgtgttca
tcaagtgaagccgtcactaagtcatgccttaaaggctctggctccaagaagcttagccat
tcagttacttgggctgatcagagtgatggtcgtggtgatctttgtgaggttagaagcgat
gatatcgattcaggtcttaatacagaggatgtctcacgccttgcattagcagaagcatgt
gctaaggcgttgagccaggctgctgaagctgtttcttcaggagatttagatgcaagtgat
gccgctgcaaaagctggaatcgttttgttgccaagcacacatcaacttgatgaagaagtt
tccgaggaggaaaccgaggaggaaatgagtgaagaagaggaggaggcaactcttttgaag
tggccaaacaagccagggacgccggattctgatttattcgaccgtgatcagtcttggttc
gatgaaactccagaggggttcaatctaactttatcaccttttgcaatgatgtgggactca
ctgtttggatgggtgtcatcctcttcactggcgtatatctatgggaaggatgagtctgct
catgaggagttcttgtcagttaacgggaaggagtaccccaggaggattagattgggagaa
gggctttcctcagagatcaaggagacgattgctgggtgtcttgcaagagctgtgtctaga
gttgccactgttctcaagctgccagtacctatatccgagttagaaaagggactaggaagc
ttgttggagacaatgtcgttgacaggggcggttccgtcgtttaggatagagcaatggtta
gtggttgtacttctgttcctggacgcgttgtctgtgtgccggatccctcggattgcgcct
tatttattaaacagaaacaaggtgttggaaggaagtgggattggtaatgaagagtatgag
acaatgaaggagattctgttaccgcttggccgtgttcctcagtttgctacactatgcggg
gcttag
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