Brassica napus (rape): 125581860
Help
Entry
125581860 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase ATL31-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
125581860
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125581860
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
125581860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-RING_16
zf-C3HC4_3
zf-Nse
Prok-RING_1
Prok-RING_4
Baculo_RING
RINGv
PHD_NSD
FANCL_C
zf-RING-like
zf-RING_6
Rtf2
Tmpp129
zf-RING_4
zinc_ribbon_16
Motif
Other DBs
NCBI-GeneID:
125581860
NCBI-ProteinID:
XP_048603948
LinkDB
All DBs
Position
C2:53871197..53872745
Genome browser
AA seq
370 aa
AA seq
DB search
MKQPSLPIAVLFLLLTMSELASGQPSQSDPNNRYDYGGRLSPVMAVVVVVVIALLFFMGF
FTIYLRHCTSASDGGSVNPRVGARRVINATVARGLDAEMLETFPTFVYSEVKTQMIGKGA
LECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLKSHVTCPVCRTNLAEQEQTTAGPVE
PEVVTEIDLESQQTVVPEPAVEDGSVARVKLPRSHTTGHSVVLPGECTERFTLRLPEDLR
KKIMANWKMNRSNSLLVRSRSGKPVERSRARSDRWLFIKTPSFLWRSRDDGSIRLGGNGS
VKANAVTSPTGDSVRAERWNFLRNPSFMWRGTPVPSPRVEVNKDGEGTSSVQGQHTGTVG
LSSGSVRLPV
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaccatctttaccaattgctgtcctgtttctgttactaaccatgtcggagcta
gcttctggtcaaccgagccaatccgacccaaacaaccggtatgactacggcggcaggtta
agtcccgtcatggctgttgtcgtggtggtcgtgatcgctcttctcttcttcatgggcttc
ttcaccatctacctccgtcactgcactagcgcatccgacggcggcagcgttaacccacgt
gtaggagcgaggagagtgataaacgcgacggtagcgcgtgggctagacgcggagatgctc
gagacgttcccgactttcgtttactctgaagttaagacgcagatgataggtaaaggcgcg
ttggagtgtgcgatatgtctgaacgagttcgaggacgacgaaacgctgcgtttgctgcct
aagtgcgatcacgtgttccaccctcactgcatcgacgcgtggctgaagagtcacgtgact
tgtccggtttgccggaccaatctcgctgagcaagagcagacaacagctgggccggtcgaa
ccggaagtggttaccgaaattgatctcgagtcccagcaaacggtggttcctgaaccggcg
gtggaagacgggagtgtggcacgtgtcaagctcccgaggtcgcacacgacggggcattcg
gtggtgttgcctggagaatgtaccgagcggtttacgttaaggttaccggaagatttaagg
aagaagataatggcgaattggaagatgaaccggtcgaatagtcttttggttcgatcgagg
agtggtaaaccggttgaacggtcaagggctcggtcggaccggtggttgttcatcaaaaca
ccgtcgtttttgtggaggagcagggacgatggttcgattaggctaggtggtaacggtagt
gtcaaagcaaatgcagtaacaagtccaaccggtgattcggtacgagcagaacgatggaat
tttcttagaaacccgtcttttatgtggaggggtacgccggttccttcgccgagagttgaa
gttaataaagacggtgaaggaacatcatcggttcaaggtcaacatacgggtacagttggt
ttatctagtggttccgttagattaccggtttag
DBGET
integrated database retrieval system
