Brassica napus (rape): 125585102
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Entry
125585102 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase ATL9-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
125585102
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125585102
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
125585102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-ANAPC11
Zn_ribbon_Top1
zf-RING_16
zf-C3HC4_3
DUF2530
Fer4_5
Motif
Other DBs
NCBI-GeneID:
125585102
NCBI-ProteinID:
XP_048609488
LinkDB
All DBs
Position
C4:10196791..10198550
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AA seq
368 aa
AA seq
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MAIIYNRWIPRSASLLLVFLLLHSVPYGSGQPTPPVPQTRASDPVVIVITVLFFVIFSMV
FGSIFCRRSSVYSRPSVFGLTDADAAVGVVRIRRSAARGLEPEVIESFPTFIYSDVKAVR
IGKGGVECAVCLCEFEDEETLRLMPPCCHVFHADCVDVWLSERSTCPLCRADLVQKQGDG
GSDLSSDPGTVSSGSDPERGGLEASDRHLLDGVTWTNSNNITPRSKSTGLASWSITGLLF
PRSHSTGHSLVQPVGDLDRFTLRLPDDVHRQLMKTRTIRNVTLPQARSSRSGYRSGSVGS
GTGGVFSYGRKNHNHNRRLHSLSFSFSFRSGSVRSTFGGDTVAPPKNFPAANESGERSFE
RLRPDERV
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcatttacaaccgttggatcccacggagcgcttcattacttctcgtctttctc
ttgctccactccgtaccgtatggatcaggtcagcccacaccgcctgttccccaaacgaga
gccagcgacccggttgttatagtgataacggtcttgttcttcgttatcttcagcatggtc
ttcggctccatcttctgccgccgaagctccgtgtactcgaggccttcggtttttggactc
accgacgcagatgctgcagtcggcgttgtcaggatcaggaggtcggcggcgcgtggactc
gaaccggaggtgatagagtcgttcccgacgtttatctactcggacgtgaaggcggtgagg
atcggaaaaggcggtgtcgagtgtgcggtttgtctctgcgagtttgaggatgaggaaacg
ctacgtttgatgccgccttgttgccacgtgttccacgctgattgcgtagacgtctggctc
tcggaacgttccacgtgtcctctctgtagagctgatcttgtccagaaacagggtgacggt
gggagcgacttgagttcggatccgggtacggtttcgtcgggttcggatcctgagagaggg
ggtttggaagcttccgacaggcatttgctggacggcgtgacgtggaccaatagtaacaac
ataacgcctcggtcaaagtcaacgggtttagccagctggagtataaccggtcttttgttc
ccgaggtctcactcgaccggacattcgctggttcaaccggttggagatctcgaccggttt
acactgaggttaccggatgatgtacataggcagctgatgaagacgaggacgataagaaac
gtgacgttacctcaggcgaggagttcacggagcggttacagaagcggtagtgtcgggagc
gggacaggcggcgtgttctcgtacggtcggaagaatcataatcacaaccgacggctgcat
tctctttctttctccttctccttccggagtggttccgtacggtctactttcggtggagat
acggtggctccgccgaagaattttccggcggctaatgaatctggtgaacggtctttcgaa
cggctccgacctgatgagcgggtgtaa
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