Brassica napus (rape): 125587558
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Entry
125587558 CDS
T04128
Name
(RefSeq) isopentenyl-diphosphate Delta-isomerase II, chloroplastic-like
KO
K01823
isopentenyl-diphosphate Delta-isomerase [EC:
5.3.3.2
]
Organism
bna
Brassica napus (rape)
Pathway
bna00900
Terpenoid backbone biosynthesis
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
Module
bna_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
bna_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
bna_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
125587558
Enzymes [BR:
bna01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.2 isopentenyl-diphosphate Delta-isomerase
125587558
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-GeneID:
125587558
NCBI-ProteinID:
XP_048614245
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All DBs
Position
C5:55943385..55945379
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AA seq
278 aa
AA seq
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MSASSLFNLSLIRFRSLSSSRFLRLPQSPLRSVSISPRKFRAFSGAAMTTDAGMDAVQRR
LMFDDECILVDETDRVVGHDSKYNCHLMENIEAKNLLHRAFSVFLFNSNYELLLQQRSKA
KVTFPLVWTNTCCSHPLYRDSELIEENALGVRNAAQRKLLDELGIVAEDVPVEEFTPLGR
MLYKAPSDGKWGEHELDYLLFIVRDVKVEPNPDEVAEIKYVSREGLKELVRKADAGEEGL
KLSPWFRLVVDNFLMKWWDHVEKGTLGEAVDMKTIHKL
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcttcttctttatttaatctctctttgattcgcttcagatctctctcttcttcc
cggtttctccgtcttcctcaatcaccgctccgatccgtttccatatcaccgagaaagttt
cgagctttctccggtgccgcaatgacgacagatgctgggatggatgctgttcaaagacgc
ctcatgttcgatgacgaatgcattcttgttgacgaaactgatcgtgttgtggggcatgac
agcaaatataattgtcatctgatggaaaatattgaagctaagaatttgcttcacagggcg
tttagtgtatttttattcaactcgaactatgagttacttctccagcaaaggtcaaaagca
aaggtgaccttccctctagtgtggacaaacacttgttgcagccatcctctttaccgtgac
tcagagcttatcgaagagaatgcactcggagtgaggaatgctgcacagagaaagcttctc
gacgagctcggtattgtagctgaagacgtaccagtggaagagttcactcccttgggtcgt
atgctttacaaggctccttctgatggcaaatggggagagcacgaactggactacttgctg
ttcattgtgagggatgttaaggttgagccaaacccggacgaagtagcggagatcaagtat
gtgagcagggaagggctgaaggagctggtgaggaaagcagacgctggggaggaaggtttg
aagttgtcgccgtggttcagattggtggtggacaatttcttgatgaagtggtgggatcat
gttgagaaaggaactctcggtgaagctgtagacatgaagaccatccacaaactctga
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