Brassica napus (rape): 125587921
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Entry
125587921 CDS
T04128
Name
(RefSeq) transcription initiation factor TFIID subunit 12-like
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
bna
Brassica napus (rape)
Pathway
bna03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125587921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
125587921
03036 Chromosome and associated proteins [BR:
bna03036
]
125587921
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125587921
Coactivators
SAGA/TFTC/STAGA complex
125587921
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
125587921
STAGA complex
125587921
TFTC complex
125587921
SAGA complex
125587921
SLIK complex
125587921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
125587921
NCBI-ProteinID:
XP_048615268
LinkDB
All DBs
Position
C5:52480541..52483763
Genome browser
AA seq
527 aa
AA seq
DB search
MEQPRQTSTASQPPETPSQPSEPAPKPAVLSQIQQPPSTNPNPSSASSITSSPAPPSPSL
NPNPNPPQYTRPVTSPATQHLSPSLGRPPPPSYSRPWQPHSSYAHFSSSASSSPLLSSSS
AQASSSSSSLPVAGQQRGGMAIGVPASPIPSPSPTPSQPPASAFPGSFGQQYGGLGRGSV
GMSEASSNSSVPQGRMMQGTQGMGMMGTIGSGSQMRPSGMAQHQQRPAQSSLRPASSPSS
SSPVPQNFQGHSLMRPSAIGSPGVQSTGAANQPWLSSSNQGKPPLAPPSYRPQVTNPSMP
QRSHVPQHHPSTSPAASQPQQQQHQLQPQEQHQQLRSPHQPLPYSHQPPRVQGSVNQKAA
SLAMPNQPPVTQPGNQAKTVSAENEESDDRILGKRSIHEILQQIDPSEKLDPEVEGILAD
IAEDFVESITTFGCSLAKHRKSDTLEAKDILLHVERNWNIRPPGFSSDEIKTFRKPVTTD
IHKDRLAAVKKSMTVTEAANARFGTANARGGQAKTPANPLASTTFNH
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaccccggcaaacctcgacggcgtctcagccaccggaaacaccctctcaaccg
tcggagccagctccaaaaccggcggttttatcccagattcagcaacctccttccaccaat
ccgaatccctcctccgcgtcctctatcacctcctccccagccccgccatcgccgtcgctc
aatccaaaccctaatccacctcaatacacacgtccggtgacatctccggcgacgcaacat
ctctccccttctttaggtcggcctcctccaccgtcgtactcgagaccatggcaaccgcat
tcctcatacgctcacttctcctcctccgcgtcgtcgtctccgttgctatcttcctcatca
gctcaggcctcttcgtcttcttcgtccctgcctgttgctggacagcaacgaggcggtatg
gcgatcggcgttccagcttctccgatcccgagcccttctccgactccttctcagcctccg
gcgtctgcttttccggggtcttttgggcagcagtacggcggattgggtcgtggaagtgtc
ggaatgtcggaagcgagctccaattcaagtgtcccgcagggtaggatgatgcaaggaact
caggggatgggaatgatggggactattggctcaggttctcaaatgcggccgagtgggatg
gctcagcaccagcagagaccggctcagtcctctctaaggccagcttcctcgccgagtagt
tcatctcctgttccccaaaactttcaagggcatagccttatgagaccttcagctattggt
tctcctggtgtccaatccactggtgcagcaaatcaaccgtggttatcatcttcaaaccaa
gggaagcctcctttggcacccccttcttatagaccgcaagtaactaatccctccatgcca
caaagatcccatgttcctcagcatcatccttccacttcaccagcggcttcacagcctcag
caacaacagcatcagcttcaacctcaagagcaacatcaacaattgagatctccgcatcag
cctttaccttactcacatcaaccgccccgggtccaagggtcggtgaatcagaaagctgct
tctctagcaatgccgaaccagccccctgtgacccaaccaggaaaccaagctaaaacagtt
tcagcagagaatgaggagtctgatgatcgtattctggggaaaagaagcatccatgagata
cttcagcagattgatccgtcagagaaattggatccagaggttgaaggcatccttgctgat
attgctgaagactttgtggagtcaatcacaacttttggctgttctttagccaagcataga
aagtcagatactctagaggctaaggacatcttgctccatgttgaaagaaactggaatatc
aggcctcctggttttagcagcgacgagatcaagacgtttcgaaagccagtgaccacagat
attcacaaagatagacttgccgctgtaaagaagtctatgacggtaacggaagcagcaaac
gccaggttcggaacggctaatgcaagaggcggtcaggcaaagacgcctgctaatccattg
gcctctacaactttcaatcactga
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