Brassica napus (rape): 125587934
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Entry
125587934 CDS
T04128
Name
(RefSeq) mRNA-capping enzyme-like
KO
K13917
mRNA-capping enzyme [EC:
2.7.7.50
3.6.1.74
]
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125587934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
125587934
Enzymes [BR:
bna01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.50 mRNA guanylyltransferase
125587934
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.74 mRNA 5'-phosphatase
125587934
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
125587934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
mRNA_cap_enzyme
mRNA_cap_C
DSPc
Tc-R-P
DNA_ligase_A_M
PTP-SAK
Y_phosphatase2
Y_phosphatase
Y_phosphatase3
PTP-NADK
Motif
Other DBs
NCBI-GeneID:
125587934
NCBI-ProteinID:
XP_048615290
LinkDB
All DBs
Position
C5:52889838..52895493
Genome browser
AA seq
669 aa
AA seq
DB search
MVATMDLNASPQPEEDDEPYVRHLEDYSSRDDRIESAVEIARRERDERRKRMRYDKPTHN
SQPAYRDQYYQNRNTRAYDRYKIPQGWLDCPPSGHEIGFLVPSKVPLNEAYNNHVPPGSR
YSFKQVVHNQRIAGRKLGLVIDLTNTTRYYSTTDLKREGIKHVKIACKGRDSVPDNVSVN
TFVNEVNQFVLNLKHSKKYILVHCTHGHNRTGFMIVHYLMRSGPMNVTQALKIFSDARPP
GIYKPDYIDALYTFYHEIKPESVICPSTPEWKRSTELDLNGEAVPDDDDDDGGPAGPVQE
EPHQVEVKMSNDDVLGDEIPPDQEEGYRHFFYRMLSLNIGGRGCSQFPGSHPVSLNRDNL
QLLRQRYYYATWKADGTRYMMLLTMDGCYLVDRSFRFRRVQMRFPFKHPTEGISDKVHHF
TLLDGEMIIDTLPDKQRQERRYLIYDMVAINGQSVVERPFYERWKMLEKEVIDPRNHEKA
RSHIYRYDLEPFRVRRKDFWLLSAVEKVLKGFIPSLSHEADGLIFQGWDDPYVARTHEGL
LKWKYPEMNSVDFLYEQDESGRGMLSLFERGKKKHMDGNNVVFRDDSDPAEYSGKIVECS
WDQDEQVWVSMRVRVDKSTPNDINTYRKVMRSIKDNITEEVLLQEIREIIRLPMYADRIQ
MDSKAARRR
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggttgctacgatggacttaaatgcttccccacaacctgaagaagatgacgaaccttat
gtgaggcatcttgaagattattcgtcgcgtgatgacaggatagagtctgccgtggagata
gcaagacgggaacgtgatgagagaaggaaacgaatgagatatgacaagccgacgcataac
tctcagccagcttaccgtgatcaatattaccagaatcgaaacactagagcttatgataga
tacaagatccctcaaggttggctagactgccctccctctgggcatgagataggattcctc
gttccttccaaagttcccctgaacgaagcttacaataatcatgtgcctcctgggagtaga
tactcttttaagcaggtggtccataaccagaggatagctgggagaaagcttggtctagtg
attgatttgacaaatacaactcgttactattctacgacagacttaaagagggaaggcatt
aagcatgttaagattgcatgcaagggtcgtgattcagtgccagataatgtgtctgtcaac
acttttgtcaatgaggttaatcagttcgtcctaaatctaaaacactcaaagaagtatatt
ctcgtccactgtacacatggacataatcggacagggtttatgatagttcattatcttatg
cgatctgggccgatgaatgttacacaggcattaaaaatcttttccgatgcccgcccccct
gggatctataaacctgactatattgatgctttatacacgttttatcacgaaataaaacct
gagagtgttatttgcccatcaactccggaatggaagaggtctaccgagcttgatttaaat
ggtgaagctgtaccagatgatgatgatgatgatggcggtccggctggtcctgtgcaggaa
gaaccccatcaggtggaagtcaagatgtcaaatgatgacgttttgggtgatgaaataccc
cctgaccaggaggaaggttaccggcacttcttttataggatgctatcgctgaatattggg
ggaagaggatgttcgcaatttccaggttcacaccctgtatccttaaacagggataatttg
caactcttgagacagcggtactattatgcaacatggaaggctgatggaacgcgatacatg
atgctgctaaccatggatggatgttatttagtagataggagctttaggttccggagagta
caaatgcggttccccttcaaacacccaactgaaggcatatctgataaagtgcatcacttc
acattgcttgatggagaaatgattatagataccttgccagataaacaaaggcaggagagg
agatatctaatctatgatatggtagcaatcaacggccaatcagttgtagagcggcctttc
tatgaaagatggaagatgctcgagaaggaggtgatagatccccgaaatcatgagaaggca
agaagtcatatctacagatatgatcttgagccttttagggtacggagaaaagatttttgg
ttgctttctgcggttgaaaaggttttgaagggtttcattccatcactttcacatgaagcc
gacggtcttatatttcagggctgggatgacccttatgttgcccgtacccatgaaggtcta
ctgaagtggaagtatccagaaatgaactcggttgactttctatacgaacaggatgagagt
ggcaggggaatgctttccttatttgaaagggggaagaagaagcatatggatggaaataat
gttgtttttagagatgattcagacccggccgagtactctgggaagattgtagagtgttct
tgggatcaggatgagcaagtctgggttagcatgcgggtcagggtcgataaatcaacgcca
aatgatatcaacacttatagaaaggtgatgagaagcataaaggacaacatcacagaggaa
gtgttgctgcaggagataagggagatcatccgtttgcctatgtacgcggaccgtattcag
atggatagcaaagccgcgcgccgcagatga
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