Brassica napus (rape): 125588701
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Entry
125588701 CDS
T04128
Name
(RefSeq) VPS35 endosomal protein sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
125588701
Membrane trafficking [BR:
bna04131
]
Protein recycling
Others
Retriever complex
125588701
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps35
GCP_N_terminal
Motif
Other DBs
NCBI-GeneID:
125588701
NCBI-ProteinID:
XP_048616361
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All DBs
Position
C6:7251212..7257973
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AA seq
911 aa
AA seq
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MEFEFRRRDYGADHESHLLPRSRTQKHPLSSPIASRQHQMKTVRDNDPPDFFDPLRGLDV
NASAEDKVEEEEEADTSLSTEAVTQELTKEWKSLKRILIQRFPVSKVISFSPISNVITKG
FKVDTPSAQSHLEETGSEKTSLEETAKVIDQQEYLAKVRELIDGITKAWEAEDRVTSLKL
SIKVTKLLMDTTVLQFYPTVFVVVTDMLDMVGDMVWERIKEKAEHDVDGTMICTLPNDFQ
ASDICLEARETCYNWFCKVGSVRELLPRIYLELAILPCWRFLINQPREVLDRLVMMVRGL
ADPLASLYCRLYMVHRMRKLGFCRSGYLIKCVKDIEDVLAPILVGKDGCSCITDDKKLLF
NLMEPAIEYIMKCLLLTGRQENNVLGILEELGFGRNKSQPSDNSSHVSILLHHLLKALPS
EIVSSQAMEILHMIKCSNDCSFSQVLNYRLLGNRLCEGRSQEGFLSSLVNEIMQAASQYQ
TLYDYLRIMDAYVDLLLQNKMENHLDALLDALLDDIVTLARDKFLSEEEQASLQSIILKL
LSHFEDLQKVLSLNHFIEILDLMSGTSKKSVNMHLLSMGTRNGCICDSTTVQLLFEVSQG
LYDATDFVNIKDDDNRQTSHLISRFVEMVDYGAERERQLLFLAECRGAFSGIHELKETLV
RSSNTLAVKAGKKHINFVKSCLAFSEVTIPSVTVPTKQINLYLETAEVALLGGLISHTDG
LVMSAVECLEDVAPTDGLKSIDADSMASVVCNLCSLLVMVPGNPEKGVLEILKSIFSATC
SSSWAMSRLKVKILCAIISLLSTLAQDNLPYRSANPEIIGNDLLFFGDSSYKNELVSWSQ
LVVGELVDAIEQESSQTARGNIALEACNCISSALVMNEKVSQLCSRLLETAKGCLGATDR
YLEATKQSLHL
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgagttccggcgtcgcgactatggagctgaccatgaatctcatctccttcct
cgctcacgaactcaaaagcaccctctttcctctccaattgcttctcgtcaacaccagatg
aaaactgtcagagataacgatcctcctgacttctttgatccattgaggggattggatgtg
aatgcttcagcagaagacaaggttgaagaagaagaagaagcagatacttctctatccact
gaagcggtgactcaggagctgacaaaggagtggaagtctcttaaacgtatcttgatccag
cgcttccctgtctccaaagtcatttctttttctccaatatctaatgtaataacgaaaggt
ttcaaagttgacaccccttccgctcaatcacatttggaggaaacaggcagcgaaaagact
tctctggaagaaactgctaaagtgatagaccaacaggaatatctagccaaagtacgcgag
ctaatagatggaataaccaaagcttgggaggctgaagatcgagtaacatcgttaaagtta
tcaattaaggtcacaaaacttctgatggacacaacagttttacagttttatcctacagtc
tttgttgtagtcactgacatgcttgatatggttggggatatggtgtgggaacggatcaag
gagaaagcagaacatgatgttgatggaacaatgatctgcaccttaccgaatgattttcaa
gcaagtgatatctgcctcgaagcaagagagacttgctataactggttctgcaaagttggt
tcagttcgagaacttcttccccgcatttacttggagctggcaattttaccttgctggcgt
ttcctcattaatcaacccagagaagttctggatcgtttagtcatgatggtgagaggtctt
gcagatccactggcatctttgtattgtcgtctttatatggtgcatcgtatgcggaagttg
ggtttctgccgttcaggatatctaatcaaatgcgtcaaggatattgaagacgtattggca
cctattttagtgggcaaggacgggtgttcctgtattacagacgacaaaaagttgcttttt
aatttgatggaaccagccattgagtatataatgaagtgcttattgctcactggacgtcag
gagaacaatgtgttgggcatacttgaggagcttggatttggaaggaataaatctcagccg
tccgacaactcttcacacgtgtccattttacttcatcacctactcaaggcacttccatcc
gaaatagttagttcacaagctatggagatcctgcatatgattaaatgcagcaatgattgt
tctttcagtcaggttttgaattacaggttacttggaaataggttgtgtgaagggagatct
caagaaggttttctgagttcactcgtcaatgaaattatgcaggctgcttctcagtatcag
acgctgtatgactacttgagaattatggacgcatatgtggatctgttgttgcagaacaag
atggaaaatcatttggatgcgctcttggatgcgctcttggatgatattgtaactctagct
cgtgacaagtttctttctgaagaagaacaagcaagtttgcaatccataattttgaagctg
ctgtctcatttcgaggacttgcaaaaagtactttctctgaatcatttcatcgagatcttg
gatcttatgtctgggacttcaaaaaaaagtgttaacatgcatctcctgagcatgggtact
aggaatggctgcatatgtgattcaacaaccgtgcaattgctttttgaagtttctcagggt
ctttatgatgctacagatttcgttaacataaaggatgatgataatcgacagacatcacat
ttaatttctcgctttgttgagatggttgattatggggcagaaagggaacgccagttgttg
tttttggcggagtgtcgtggcgcctttagtgggattcatgaacttaaggagacacttgtc
cgttcaagcaacaccttggcagtaaaagcaggaaagaagcatatcaactttgtaaagtct
tgcctagcattcagcgaagttaccattccatctgttacagttcctacaaaacagataaat
ctttatctcgaaactgctgaggttgcgcttttaggtggtttgatttctcataccgatgga
ctggtcatgtcagctgttgagtgtctagaggatgtagcgccaacagatggtttaaagtca
attgatgcggatagtatggcgtcggtggtatgcaatttgtgcagcctcttggtaatggtt
ccaggtaatcctgagaaaggcgtgttggagatccttaagagcatattttctgctacttgc
tctagttcatgggcaatgtcgagattgaaggtgaagatactttgtgctatcatttcactc
ttgtcgacacttgcccaggataatctgccttaccgttctgccaatccagagataattgga
aacgatttactgttctttggtgattcgtcatacaagaatgaacttgtctcttggagtcag
ctagttgtaggtgaacttgtagacgctattgaacaagaatcttcacagactgctcgcggg
aacattgcgcttgaagcttgcaattgcatatcatcagcactagttatgaatgagaaagtc
tcacaactttgctcgagactgctcgaaacagcaaaaggttgtttgggtgccacggacagg
taccttgaagccactaagcaatcactccatttatga
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