Brassica napus (rape): 125591639
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Entry
125591639 CDS
T04128
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
125591639
Spliceosome [BR:
bna03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125591639
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_PARP14_3
RL
TGF_beta
Motif
Other DBs
NCBI-GeneID:
125591639
NCBI-ProteinID:
XP_048622142
LinkDB
All DBs
Position
C8:complement(8258202..8261323)
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AA seq
506 aa
AA seq
DB search
MGEIRERERNLKINSRDRVKALTTKKASSIYTSLLFSTSRRLLMAESSKVIHVRNVGHEI
SENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSSAITALQFFTNVQPTIRGRNVYIQF
SSHQELTTAEQNIHGREDEPNRILLVTVHHMLYPITVDVLHQVFSPYGFVEKIVTFQKSA
GFQALIQYQAQPCAASARTSLQGRNIYDGCCQLDIQFSKYALPLAYILHFIVTFLVSRVV
VSIDCSFIFSLEELQVNYNNDRSRDYTNPNLPSEQKGRLPHPGYGDAGVAYPQMANTSAI
AAAFGCGLPPGITGTNDRCTILVSNLNTDSVDEDKLFNLFSLYGNIVRIKLLRNKPDHAL
VQMGDGFQAELAVHFLKGAMLFGKRLEVNYSKHPNITPGTDSHDYVNSNLNRFNRNAAKN
YRYCCSPTKMIHLSTLPQDVTEEEVVNHVQEHGAILNTKVFEMNGKKQALVQFENEEEAA
EALVCKHATSLGGSIIRISFSQLQTI
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaataagagagagagagagaaacttaaagataaatagtagagatagggttaaa
gcattgacgacgaaaaaggcttcttcgatctacacttctcttctcttctctacctctcgc
aggttgttaatggcggaatcatccaaagtcattcatgttcgtaatgtcggacatgagatt
tctgaaaatgatttgcttcagcttttccaaccatttggtgtcataactaagctcgtcatg
ctcagggcaaagaatcaggctcttctccagatgcaagatgtttcttcagcaatcactgct
cttcagttcttcactaatgtgcagccaaccataagaggtaggaatgtgtatatccaattc
tcgtcccaccaagaattgacaacagccgagcagaatattcatggacgtgaagatgagccg
aatcgtattctcttggtcacagtccatcacatgctgtatccaattactgttgacgtcctg
catcaagttttttctccctatggatttgtggagaagatcgtcactttccagaagtctgct
ggttttcaagctcttatacagtatcaggcacaaccgtgtgctgcctctgctaggacttct
ctacagggtcgtaacatatatgacggctgttgtcagttggatatccagttctcaaagtat
gctctgcctcttgcttacatattgcatttcattgttacatttttagtctctagggttgtc
gtgagtattgactgctctttcattttcagccttgaggagctgcaagtaaattacaacaac
gatcgatctagggattatacaaatccaaacctgccatcagagcaaaaaggccgtttacct
caccctggctacggtgatgcaggagtggcatatcctcagatggcaaacacatctgcgatt
gcagctgcctttggctgtggcttgcctccgggtataactggcacaaacgataggtgtaca
atccttgtctctaatcttaatactgatagtgttgatgaggataagctgttcaatctgttt
tctctttacgggaacattgtgaggataaagcttcttcgtaacaaacctgaccatgccctt
gtccaaatgggagatggtttccaggctgagcttgcagtacatttccttaagggagcaatg
ctgtttggtaagcggctagaggtaaactactcgaagcatccaaatattacaccaggaaca
gactcgcatgactatgtaaactcgaacctgaaccgcttcaaccgcaatgctgcaaaaaac
taccgctattgctgctcccctaccaagatgattcacttgtccactcttccgcaagacgtg
acagaggaagaagtggtgaaccatgtccaagaacacggggcgatactgaacacaaaagtg
tttgagatgaacgggaaaaagcaagctctggtgcagtttgagaacgaggaggaagctgcg
gaagcactggtttgcaagcacgcgacctctctaggcggatcaattatcagaatctccttc
tctcagctacagacaatttaa
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